Notechis scutatus (mainland tiger snake): 113424511
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Entry
113424511 CDS
T09026
Symbol
PDGFRB
Name
(RefSeq) platelet-derived growth factor receptor beta
KO
K05089
platelet-derived growth factor receptor beta [EC:
2.7.10.1
]
Organism
nss
Notechis scutatus (mainland tiger snake)
Pathway
nss04010
MAPK signaling pathway
nss04020
Calcium signaling pathway
nss04510
Focal adhesion
nss04540
Gap junction
nss04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
nss00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
nss01001
]
113424511 (PDGFRB)
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
nss04090
]
113424511 (PDGFRB)
Enzymes [BR:
nss01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
113424511 (PDGFRB)
Protein kinases [BR:
nss01001
]
Receptor tyrosine kinases (RTK)
PDGFR family [OT]
113424511 (PDGFRB)
CD molecules [BR:
nss04090
]
Proteins
113424511 (PDGFRB)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
Ig_3
I-set
ig
Ig_2
VEGFR1-3_N_Ig-like
C2-set_2
Adeno_E3_CR1
VEGFR-1-like_Ig-like
Ig_4
V-set
C1-set
Motif
Other DBs
NCBI-GeneID:
113424511
NCBI-ProteinID:
XP_026542031
Ensembl:
ENSNSUG00000017176
UniProt:
A0A6J1VFV8
LinkDB
All DBs
Position
Unknown
AA seq
1073 aa
AA seq
DB search
MPASLQKMLVFLVLFLTSAKEISSLEITPSAHEVVLNLYTDFTLKCSSHNEVHWKTDNKH
TKLDTVLEKRGTIFTNTLTLRNLTGLNTGEYSCTNDQALDGKSIYVFVPDLSMPFLPSIP
EETFVFSPGYGEVVIPCRVTNPNATVSLHEKRVNDPVPGMYFPQQGFKGRFEDRTYICKA
MIEDEEFESETFYVYTIQVPFPSSFINVSISAVQTILKQGENIIVTCAVRGVELIGYTWR
YPGQMVGKEVKPMTHIVSGDKHYTSSTLTIHNADLDDQGLYACEARDTYFGQQEEQSIFI
RVIERGFVTFHTVLNETIFAELHKSHTFLIQMEAYPSPTIDWFQNKKPLTSESNSDFAIN
SRNLSETRYQTTLTLVRVKASEGGLYTVRAFHEDDVKELSFYLQINVPATVTELKDSSNK
TNGEQTVICTTEGMPQPEITWYTCNNDKWCAGETTKILGNTSEEMNLQTNFTYEDDRKVY
VVTSKLHFHRVDEPIFIQCAAQNLLGAHTQQITLVPYNLPFKVIVISVIVAFVILMVLFL
VILIFLWRKKPRYEIRWKVIESVSSDGHEYIYVDPMQLPYDSSWEVPRDRLVLGRTLGSG
AFGRVVEAIAHSLSHSQSTMRVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNIVNLLG
ACTKGGPIYIITEYCRNGDLVDYLHRNKHTFLQCYSEKAKQEAELYGNGMRVDRLQSHTS
VSVESDGGYMDMSKDESLDYVPMSDMKGEIKYVDIDSSNYGATYELDSCSPSASEKVTLI
SESPLLSYIDLVGVSFQVAKGMEFLASKNCVHRDLAARNVLICEGKLVKICDFGLARDIM
RDSNYISKGNTFLPLKWMAPESIFNNLYTTLSDVWSFGILLWEIFTLGGTPYPELPMNDQ
FYNAIKRGYRMSKPTHASNEIYEIMQKCWEEKFEIRPPFFQLVVLMGNLLTDSYKKKYQQ
VNEEFLKSDHPAIMRTRPRNTGFSPSRSTASDSDSSSSVLYTAVEQNGADNDYIIPLPDP
KPEGDTNNPPEASSSRASSTLNEANTSSTISCDSPLAPEQEEEQEAPELKSDC
NT seq
3222 nt
NT seq
+upstream
nt +downstream
nt
atgcctgcttccttgcagaagatgctagtcttcttggtcctcttcctcacaagtgcgaaa
gaaatcagctccctggaaattactcccagtgcccatgaagttgtcctcaacctctacact
gattttaccctgaaatgttcaagccacaacgaggttcactggaaaacagacaacaagcat
accaaattagacactgtcctggagaaaaggggcaccatttttaccaacaccctcacatta
aggaacttgactggtttgaacacaggtgaatattcctgcaccaacgatcaagccctggat
ggaaagtccatctacgtttttgtaccagatctctccatgcctttcctaccaagcatccct
gaagagacctttgtgttcagcccaggttatggtgaagtcgttattccttgccgtgtgaca
aaccccaatgccacagtatctcttcatgaaaagagggttaatgatccagtccctggaatg
tattttccacagcaaggctttaaaggacggtttgaagacaggacctatatctgcaaggca
atgatagaagatgaagagtttgagtctgaaacattctatgtctacactatccaagttcct
tttccttcatccttcatcaatgtttctatcagcgcagtgcaaactattttgaaacaaggt
gaaaatattattgtgacgtgtgcagtaagaggcgttgagttgatcggttatacctggcgt
tatcctggacagatggtaggcaaagaggtaaaacccatgacgcacattgtttcaggagac
aaacattatactagttccaccttaactattcacaatgcagacttggatgatcaaggtcta
tatgcatgtgaggccagggacacgtattttggacaacaagaagaacaaagtatcttcatc
agagtgattgagcgtggctttgtgacttttcacactgttctaaatgagaccatatttgca
gaactgcacaaaagtcacacctttttgatacagatggaagcctatccaagtccaaccatc
gactggtttcagaacaagaagcccctgacttctgagagcaacagtgattttgctatcaac
agcaggaatttgtcagaaaccaggtatcagactactctgaccctcgtaagggtgaaagca
agtgagggaggtttgtacactgtccgagcatttcacgaagatgacgtaaaagaactctcc
ttttatttgcagattaatgtcccagctacagtcactgaactgaaagacagtagcaacaaa
acaaatggtgagcaaacagtgatctgtactacagaaggaatgccccaaccagagattacc
tggtatacctgtaataatgacaaatggtgtgcgggggaaactactaagatcctgggaaac
acctcagaagagatgaatctgcaaacaaatttcacttatgaagatgacagaaaagtatac
gttgtgacaagcaagctccactttcacagagtagatgagcctatctttatccaatgtgca
gctcaaaatctccttggtgctcacactcagcaaatcaccctggtcccatacaatctacct
tttaaagtgatcgttatttcagtaatcgtggcttttgtgattctcatggttcttttcctg
gtgatcctcattttcttgtggcgaaaaaagcctcgatatgaaattcgctggaaggtgatt
gagtcagtcagctctgatgggcatgaatatatctatgtggaccctatgcaactgccttat
gattccagttgggaagtcccaagggacaggctggttttaggacgtacgttgggctctgga
gcctttgggcgtgtggtggaagcaattgctcacagcctcagccactctcagtccaccatg
agagttgctgtgaaaatgctcaagtccacagcccgaagcagtgaaaagcaggctctgatg
tcagaactgaagatcatgagccaccttgggcctcacttgaacattgtgaacttgcttggt
gcttgcaccaaaggaggtcccatctacatcataactgaatattgtcgcaacggagacctg
gtggactatctacacaggaacaagcacaccttcctgcagtgctacagtgagaaagccaag
caagaagcagaattgtatgggaatggcatgcgtgtggaccggctgcagagccatacatcg
gtatccgtagaaagcgatgggggctacatggacatgagtaaggatgaatcattggattat
gtgcccatgtctgacatgaagggtgaaatcaagtatgtagacattgattcttccaattat
ggcgcgacctatgagctagacagctgttcaccttcagcttcagaaaaagtgaccttgatc
agcgagtctcctctcctcagctatattgatcttgttggagttagcttccaagtggctaag
ggaatggagttcttagcttctaaaaactgtgtacaccgtgatctggctgcgagaaatgta
ctgatctgtgaagggaaactggtgaagatctgtgactttggcctagccagggacatcatg
cgggattcaaattatatttccaaaggaaataccttcttgcctttgaaatggatggccccc
gagagcatcttcaacaacctctacactaccttaagtgatgtgtggtcttttgggattctt
ctgtgggaaatattcactctaggtgggactccatatcctgaactgcctatgaatgaccaa
ttttataatgctattaaacgtggctaccggatgtccaaacctacccatgcatccaatgaa
atctatgaaattatgcagaaatgctgggaagagaaatttgagattcgaccacctttcttt
caactggtagtacttatggggaacctgctaacagacagctacaagaagaagtatcaacag
gtcaatgaagaattcttgaaaagtgatcaccctgctattatgcgtacgaggcccaggaac
acaggattcagtccttctaggtccactgcaagtgatagtgacagttcaagttctgtcctc
tatacagctgtagagcagaatggagcggacaatgattatatcattcctttgcctgatcct
aaaccagaaggagacactaataaccctccagaggcctctagcagcagagcaagttcaacc
ctgaatgaagcaaacacttcatctactatatcttgtgacagtcctttagccccagagcaa
gaagaagaacaagaagcacctgagttaaagtcagattgctag
DBGET
integrated database retrieval system
