Notechis scutatus (mainland tiger snake): 113424924
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Entry
113424924 CDS
T09026
Symbol
KDM2B
Name
(RefSeq) lysine-specific demethylase 2B
KO
K10276
F-box and leucine-rich repeat protein 10/11 [EC:
1.14.11.27
]
Organism
nss
Notechis scutatus (mainland tiger snake)
Pathway
nss03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
nss00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
113424924 (KDM2B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
nss03000
]
113424924 (KDM2B)
04121 Ubiquitin system [BR:
nss04121
]
113424924 (KDM2B)
03036 Chromosome and associated proteins [BR:
nss03036
]
113424924 (KDM2B)
Enzymes [BR:
nss01000
]
1. Oxidoreductases
1.14 Acting on paired donors, with incorporation or reduction of molecular oxygen
1.14.11 With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
1.14.11.27 [histone H3]-dimethyl-L-lysine36 demethylase
113424924 (KDM2B)
Transcription factors [BR:
nss03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
113424924 (KDM2B)
Ubiquitin system [BR:
nss04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
113424924 (KDM2B)
Chromosome and associated proteins [BR:
nss03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
113424924 (KDM2B)
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.1)
113424924 (KDM2B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-CXXC
JHD
F-box-like
F-box
JmjC
Cupin_8
AppA_SCHIC
LRR_At1g61320_AtMIF1
Motif
Other DBs
NCBI-GeneID:
113424924
NCBI-ProteinID:
XP_026542630
Ensembl:
ENSNSUG00000008926
UniProt:
A0A6J1VI65
LinkDB
All DBs
Position
Unknown
AA seq
1026 aa
AA seq
DB search
MANLIRAASRYCLMSVKGCFTDFHIDFGGTSVWYHVFRGGKIFWLIPPTLQNLELYEEWV
VSGKQSDIFLGDRVELCQRIELKQGHTFFIPSGWIHAVYTPVDSLVFGGNILHSFNVPMQ
LRIYEIEDRTRVQAKFRYPFYYEMCWYVLERYVFCLTQRSHFSKEYLQESMLIDTSRKRS
LDSFSSDSWGDMDEDSCDVRAQEDKDNSPDKVPKILSDVPSSPNSTHSEGKETLGKKPKS
RFFKRALSNESEESIKSATVDYSKTPTGSPATEVPAKWTHLTEFELKGLKALVEKLESLP
ENKKCVPEGIGDPQALLEDMKNILKEHAEDDQNLAISGIPVVSWPKKNAKNRAVGRPKGK
LGPSSAVKLAANRTTAGARRRRTRCRKCEACLRTECGECHFCKDMKKFGGPGRMKQSCIM
RQCIARLKSDKGDFEKEDIKFACVFCLFLAYKQKRGPGFKYASNLPGSLLKEQKINRENK
EVVPEIPKRKVECEESPRKKSDERSPKPPLDPLLRRKSSEEAHLRRKRKLDKPQEPALRK
RLKLGKEEKLFRKKRRSWKTPDDRVAAIKPLRRFKQEGGEAFPEEAPKTKESDQSRSSSP
TAGPSSEGAEPREKKKFKIRRKARLPNKELSKELSKELNQEIQKTENSLANENHQPIKSE
PESETEEDKHHLGPEQPHPLAKGFNGTPRELRHQILSSLRSGGGATTPTPRAIARPPPSL
SPPKCMQMERHVVRPPPISPPPDSLLLDDGGAHVMQREVWMAVFNCLRPGELCVCMRVCR
TWNRWCCDKRLWTKIDLNHCKSITPLMLSGIIRRQPVTLDLSWTNISKKQLSWLITRLPG
LRDLLLAGCSWIAVSALCSSSCPLLRTLDSQWVEGLKDAQMRDLLSPPTDNRPGQIDNRS
KLRNITDLRLSGLDITDASLRLIIRHMPLLSKLNLSYCNHMTDQSINLLTAVGTTTRDSL
TKVILKDCNKVTDQCLSYFKRCGSICHIDLRYCKQVSREGCEQFIAEMSVSVQFSQTEEK
LLKKLS
NT seq
3081 nt
NT seq
+upstream
nt +downstream
nt
atggccaatttaattcgggcggcctctcggtattgcctgatgagcgtgaagggatgcttc
accgattttcacattgatttcggaggcacttcggtgtggtaccacgttttccggggagga
aagatcttttggctgattcctcccacgttgcagaacctagaactctacgaggaatgggtt
gtctccgggaagcagagtgacattttcctgggggaccgcgtggagctgtgccaaagaatc
gaattgaagcaaggacacactttcttcattccttcaggctggatacatgcggtttacacc
cccgtggattccttggtgtttggtggaaatatcttgcatagctttaatgttcccatgcag
cttcgcatttatgaaattgaggacagaacaagggtacaagccaagttccgctacccgttt
tactatgaaatgtgttggtatgttttggagagatacgtattctgtctaacgcagcgctct
catttcagcaaggagtatctacaagaatcaatgttaattgatacctccaggaaacgtagc
ttggatagtttctcgtccgattcctggggagacatggatgaggactcgtgcgatgttcgt
gctcaggaagacaaggataacagtcccgacaaagtccccaagatcttgtccgacgtcccg
tcttctcctaacagcacacactcggaggggaaggagacattggggaagaagccaaaatcg
cgcttcttcaaaagggctctgtccaacgagtcggaggaaagtataaagtcagccacggtg
gactattcgaagactcccactgggtctcctgccacggaggtgcctgccaagtggactcac
ttgaccgaatttgagctgaaaggtttgaaggccctggtggaaaaactggaatcccttccg
gagaacaagaaatgtgtccccgaaggcattggcgatcctcaagctctcctggaagatatg
aagaacatcctgaaggaacatgcagaggatgaccagaatttggccatatctgggattccc
gtggtatcctggcctaagaaaaacgcaaagaaccgggcagttgggcgtccgaaggggaaa
ctgggcccttcctcggctgtgaagcttgcggcgaaccggacgactgcaggcgcacgtcgg
aggaggacgcgatgtcgcaagtgcgaggcctgcctgaggacagagtgcggcgaatgtcat
ttctgcaaggacatgaagaagtttggggggcctggccgcatgaaacagtcctgcattatg
aggcagtgcatcgcgcgcttgaaatctgataaaggagattttgagaaagaggatataaag
tttgcttgtgtgttttgtctctttctggcgtacaagcaaaagcggggccccgggttcaaa
tacgcctccaacctgcccggctctttgctcaaagagcagaagatcaaccgcgagaacaag
gaagtcgtccccgagatccccaagaggaaagtcgagtgcgaggaatcgcctcgcaagaaa
tccgacgagcgctccccgaagccccccctggaccctctcttgaggaggaagtcctcggag
gaagcccacctgcgccgcaagcggaaattggataaaccccaagaaccggcgttgaggaag
cggctaaaactggggaaagaagaaaagctgttcaggaaaaagaggcgctcctggaagacc
cccgatgaccgggtggccgccatcaaacccctgaggcgcttcaagcaagaaggcggggag
gccttcccggaggaagctcccaaaaccaaggagagcgaccagtcgcgctcgagctcaccc
accgcggggccaagttcggaaggcgccgagccccgggagaagaagaagttcaagatccgt
cggaaagctcggctgcccaacaaggagctgagcaaggagctgagcaaggagctcaaccag
gagatccagaagaccgagaacagcctggccaacgagaaccaccagcccatcaagtcggag
ccggagagcgagaccgaggaggacaagcaccacctcggcccggagcagccgcaccccctt
gccaagggcttcaacgggacgccgcgggaactccgccaccagatcctctccagcctccgc
agcggtggcggcgccaccactcccacccccagggccatcgcccggcccccgccttccctc
tcgccccccaagtgcatgcagatggagcggcacgtggtgcggccaccccccatcagtccc
ccgcccgactcgctcctgctggatgacggaggggcccacgtgatgcagagggaggtgtgg
atggctgtcttcaactgcctccgacccggggaactctgcgtctgcatgagagtgtgccgg
acctggaatcggtggtgctgtgataaaaggctgtggaccaaaatagacctcaaccattgc
aaatccatcactcccttgatgctgagcggtatcatcagaaggcagccggtcacgttagat
ctcagctggacaaatatctccaaaaagcagctcagctggcttattacccggcttccaggt
ctccgggatctgcttttggctggctgctcgtggatcgccgtgtccgcactttgcagctcc
agttgtccccttcttcgaactctggacagccagtgggtggaaggcctgaaggatgcccag
atgcgagaccttctgtccccaccaactgacaaccggccaggccaaatcgacaaccgaagc
aagctacggaacatcaccgatctccgcctgtccggcttggacatcacggacgcttctctg
cgcctgattatccggcatatgcctctcctgtccaagcttaatctcagctactgtaatcac
atgacggaccagtccatcaatctgttgacggcggtggggactaccacgcgggactcccta
accaaggttattttgaaagactgcaacaaggtgacggatcagtgcctgtcgtacttcaag
cgctgcgggagcatctgccacatcgacctccgctactgcaagcaggtcagccgggagggc
tgcgaacagttcatcgctgagatgtcggtcagcgtccagttcagccaaacggaagagaaa
ctgctgaagaagctgagttag
DBGET
integrated database retrieval system
