Notechis scutatus (mainland tiger snake): 113425983
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Entry
113425983 CDS
T09026
Symbol
TAP1
Name
(RefSeq) antigen peptide transporter 1
KO
K05653
ATP-binding cassette, subfamily B (MDR/TAP), member 2 [EC:
7.4.2.14
]
Organism
nss
Notechis scutatus (mainland tiger snake)
Pathway
nss02010
ABC transporters
nss04145
Phagosome
nss05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
nss00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
113425983 (TAP1)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
113425983 (TAP1)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
113425983 (TAP1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
nss02000
]
113425983 (TAP1)
Enzymes [BR:
nss01000
]
7. Translocases
7.4 Catalysing the translocation of amino acids and peptides
7.4.2 Linked to the hydrolysis of a nucleoside triphosphate
7.4.2.14 ABC-type antigen peptide transporter
113425983 (TAP1)
Transporters [BR:
nss02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB2, 3, 8, 9, 10 subgroups
113425983 (TAP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_16
AAA_21
AAA_22
AAA_5
AAA_30
Rad17
AAA_29
AAA_15
RsgA_GTPase
ABC_ATPase
AAA_25
LysM2_CERK1_LYK3_4_5
AAA_28
AAA_33
ABC_membrane_2
Motif
Other DBs
NCBI-GeneID:
113425983
NCBI-ProteinID:
XP_026544082
UniProt:
A0A6J1VLR0
LinkDB
All DBs
Position
Unknown
AA seq
740 aa
AA seq
DB search
MLFCPVLRTGAMNPGLWSSVALGMLLDFLALHLAWKWTPSPWENPLAFLWVVAGTRCVSL
VLAGGTLVRSGGEKLPWRLLLEGALVLSFQMPSYVSLQYLYEPKGDALHLASNWGRSDVL
ALNYLVAGAVMLLCHHLLPWGDTGSEKASSASFRRLVSCLRPEALRFVAMVVLMVFSCMG
EMAIPHYTGKVTDLLINKEEASAFKNALYMMSCYTLASATTELLCDFLYNTVMNRFHTRF
QASVFRSVVRQEIGFFSTNRTGDITSHISSGIDSMSEALSHDLSLLMWYVLRGICYYAMM
LWISVPLALFIIVTLPFILLLPKLSGKFYQRLATCVQKSLARANEVAMETFQAISTVRSF
ANEDGAAQCYEKKLQETYKLNKVEAVAYGVSVWIPEILQLALKVGILYYGGHLVTQGKLT
SGALVTFVLQEGELSTVVRVLLSCYPSVQKAVGSSEKAFEYMDRTPQIKPSGTLAPTNLE
GRMELKDVSFSYGNNGNSLVLKGVSFKLCPGTVTALVGPSGCGKSTVVALLQRFYEPEQG
QVLLDDEDLNKYEHRFLHQKVALVSQDPVLFARSLGANIAYGLEEQCEEKVIQASQQVGV
HRFISTMSHGYDTNAGEAGKQISGGQKQGIALARALIRNPKVLILDDATSALDTDSQKLL
EEEIYKEETRSRRTVLLISHRLQSVKRANLILVMEDGEIRERGTYEELVEKEGLFCQLLQ
KQPNGAEEGRSSSPNGNNRN
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atgctcttttgccccgtcttaagaaccggcgcgatgaatccgggcttgtggtcctcggtc
gccctagggatgctgctggacttcctggccctccacctggcttggaaatggaccccctcg
ccctgggagaaccctctggctttcctctgggttgtcgccgggacgcgctgtgtgtcgctg
gttctcgcagggggtaccctcgtccggtctggaggggagaagcttccttggaggctgctt
ttggaaggggccttggtcctctccttccagatgcccagctacgtcagcctgcagtacctc
tatgagcccaaaggggacgccctgcatctggcttccaactggggcaggagcgacgtcctt
gccctcaactacctggtggcgggggcggtgatgctgctgtgccatcacctcctcccttgg
ggggacacaggatcggaaaaggcatccagcgcttccttcaggcgcctcgtctcctgcctg
aggccggaggcgctgcggtttgtggccatggtggtgcttatggtgttctcatgcatgggg
gagatggcaatcccacattataccggaaaggtgacagacttgctcatcaacaaggaggaa
gcctcggccttcaagaatgctctgtatatgatgtcttgttatactttggcgagtgcgaca
acagagcttctctgcgacttcctgtataatacggttatgaacagatttcacacccgcttc
caggcctctgtcttcaggtccgttgtgcgccaggagattggcttcttcagcactaatcga
acaggtgacatcacttcccacatctcatccggcatcgattccatgagcgaagccctctca
cacgatctgagcctcctgatgtggtacgtgctccggggtatctgctactatgccatgatg
ctgtggatctctgtgcctttggccttattcatcattgtgaccctgccctttatcctgctg
ttgccgaagctctcggggaagttctaccagaggttggccacgtgcgtccagaaatcctta
gccagagccaacgaagttgcaatggagaccttccaagccatctccaccgtccgcagcttt
gccaacgaggatggggctgctcagtgttacgaaaagaagttgcaagagacctacaaactc
aacaaggtggaggccgtggcctacggggtctccgtatggattcctgagatcttacaactg
gcactcaaagtggggattctctactatgggggacacctggtcactcaagggaagttgact
agcggagctctcgttacctttgtcctgcaggagggtgagctttccacagtggtgcgggtc
ctcctttcatgctacccttccgtgcaaaaggccgtaggttcatcggaaaaggcttttgag
tacatggaccggacaccccaaatcaagccttcgggaactttggcacccacaaatttagaa
ggacgcatggagcttaaagatgtttcgttctcctatggcaacaatggcaactctctagtg
ctgaagggggtgtcttttaagctgtgtcctggtactgtgactgccctggtgggcccttcc
gggtgtgggaagagcacggtggtggccttgctccaaaggttttatgagcccgaacaagga
caggtgctgctggacgatgaggacctgaacaaatatgaacatcgcttcctgcatcaaaag
gtagcgctggtgagccaagatcccgtactctttgcccgatccttgggtgccaacattgcc
tacggcttggaagagcaatgtgaagagaaggtgatccaggctagtcagcaagtaggagtc
catcgcttcatctccacgatgagccacggctacgatacaaatgccggggaagcaggaaag
caaatttctggagggcagaaacaagggattgctcttgcccgggctttgatccgaaacccc
aaagtgctgattttggacgatgccaccagcgccttggacaccgacagccagaaactgctg
gaggaagaaatctacaaagaagaaactcgcagccgccgcaccgttctcctgatctcccac
cggctccaaagcgtgaagcgggctaatctcatcctggtcatggaagacggggagatccgc
gagagggggacctacgaggagttggtggagaaggaggggctcttctgtcagctcctgcag
aagcagccgaatggggcagaggagggcaggagcagcagccccaacgggaacaataggaat
tga
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integrated database retrieval system
