Neomonachus schauinslandi (Hawaiian monk seal): 110575093
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Entry
110575093 CDS
T08474
Symbol
AGRN
Name
(RefSeq) agrin isoform X1
KO
K06254
agrin
Organism
nsu
Neomonachus schauinslandi (Hawaiian monk seal)
Pathway
nsu04512
ECM-receptor interaction
nsu04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
nsu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
110575093 (AGRN)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
110575093 (AGRN)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
nsu00535
]
110575093 (AGRN)
Proteoglycans [BR:
nsu00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
110575093 (AGRN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_G_1
Kazal_2
Kazal_1
Laminin_G_2
NtA
Kazal_CFAI
EGF_laminin
SEA
EGF
Laminin_G_3
Motif
Other DBs
NCBI-GeneID:
110575093
NCBI-ProteinID:
XP_021539641
UniProt:
A0A2Y9GKG6
LinkDB
All DBs
Position
4:124186..158453
Genome browser
AA seq
2145 aa
AA seq
DB search
MASLRPSGSAPLQPLLLLLVVAARALPRADGTCPERALERREEEANVVLTGTVEEILNVD
PVQHTYSCKVRVWRYLKGKDMVTQESLLDGGNKVVIGGFGDPLICDNQVSTGDTRIFFVN
PAPPYLWPAHKNELMLNSSLMRITLRNLEEVEHCVEDKPGTHFTPAPPTPPDACRGMLCG
FGAVCQPSAEGSGQASCVCRKSACPALVAPVCGSDASTYSSECELRRAQCTRQRRIRLLS
RGPCGSRDPCSNVTCSFGSTCVRSADGHTATCLCPATCQGPPDGPVCGSDGADYPSECQL
LRHACARQENVFKKFDGPCDPCQGARGDLSRVCRVNPRTRRPEMLLRPESCPPRHAPVCG
DDGVTYDNDCIMGRTGAARGLLLQKVRSGRCQPQDQCADVCRFGAVCLSRRGRARCSCDR
VVCDGAYRPVCALDGHTYDSDCWRQRAECQQQRAVPAKHQGPCDQPLSPCLGVQCPFGAL
CAVKNGEAECVCLQACSGVYDPVCGSDGVTYGSTCELEATACALGREIRVARRGPCDRCG
QCRFGALCEAESGRCVCPSECVASAQPVCGSDGHTYASECELHVHACTQQISLHVVSAGH
CQACGDTVCAFGAVCSAGRCVCPRCERPPPGPVCGSDGVTYDSACHLREAACRQQMHIQE
ARAGPCEQAECGSGGSGSGEDGECEQELCRQRGGVWDEDSEDGPCVCDFSCHGVLRSPVC
GSDGVTYGTECELKKARCESQRELYVTAQGACRGPTLAPLPPAAPPHCTQTPYGCCQDNI
TAARGVGLAGCPSSCHCNPHGSYSGTCDPATGQCSCRPGVGGLKCDRCEPGFWNFRGIVT
DGRSGCTPCSCDPRGAVRDDCEQMTGLCSCKPGVAGPKCGQCPEGHALGPGGCETDSLAP
ETCAEMRCEFGASCVEEAGSAHCVCPTSTCPEANATKVCGSDGVTYGNECQLRTIACRQG
LDISMQSLGPCRDSVPPAEAAGPGAPPTPGPLATSGLNVSKALPSPPGALPRAPSSTPPS
QPTPRPSPGPWTPAGIPRTTPRPVLTMPPTAAATASLATSAFGESGSADGSGDEGLSGDL
EASGTGSGGLEPPDGGSAATPGPPVERASCYNAPLGCCSDGKTPSLDTEGSNCPATKAFQ
GVLELEGVEGQELFYTPEMADPKSELFGETARSIESTLDDLFRNSDVKKDFRSVRLRDLG
PGSSVRAIVDVHFDPATTFRASDVGQALLRQIQASRRRSLGVRRPLQEHVRFMDFDWFPA
FFLGATTGAAPAAATARATTMAHVPSAVTQRALYPSHTSRPVGRTTALPTTRQPPTTAPR
RVPGRRPLPSGPQQPPKPCDSQPCLHGGTCQDQDSAGGFTCSCPVGRRGAVCEKALHPSV
PAFGGHSFLAFPTLRAYHTLRLALEFRALEPQGLLLYNGNARGKDFLALTLLGGRVQLRF
DTGSGPAVLTSSVPIEPGRWYHLELSRHWRRGSLSVDGETPVLGHSPSGTDGLNLDTDLF
VGGVPADQAAVVLERTSIRVGLRGCIRLLDVNNQRLELSSWQGAVTRSSGVGECGDHPCL
PNPCLGGAPCQALEAGMFHCQCPPGHFGPTCSVDKNPCEPNPCHGAAPCRVLPEGEAKCE
CPQGRGGTICQTVSERDHSQPFLADFSGFSYLELKGLHTFERDLGEKMVLEVVFLARGPN
GLLLFNGQKTDGKGDFVSLALRDRFLEFRYDLGKGAAVIRSKEPVALDTWTRVLLERNGR
KGAMRVSDGPRVLGESPVPHTVLNLKEPLYVGGAPDFSKLARAAAVSSGFNGVIQRVSLK
GQELLTQEHVVRSVDVSSFAHHPCTQASGHPCLNGASCLPREASYECLCPGGFSGLHCEK
GLIEKSAGDVDALAFDGQTYIEYLNAVTESEKALQGNHFELSLRTEATQGLVLWSGKATE
RADYLALAIVDGRLQLTYDLGSQPVVLHSTVPVNTNRWLRVRAHRWPGEAAHGPGPAQGL
QHRLCGLPAGRGGGSAPAAPAGGCCHQAGASALRHPMRHTTAHHPPCVIIFYFCKLMAFL
IWFSCLCVGQRDCWTSLPTVQADKLQRQTGLAGGDDAGSMEGLTPAAASGCVPLPWATVS
QPLVLGLPRVSIRAGPVSPEQEGTAGAWGGPFLHASPQGPFWVPT
NT seq
6438 nt
NT seq
+upstream
nt +downstream
nt
atggccagcctgcggccgtccggctcggccccgctgcagccgctactgctgctcctggtg
gtggccgcgcgcgccctgccccgcgccgacgggacgtgcccggaacgcgcgctggagcgg
cgggaggaggaggcgaatgtggtgctcaccggcaccgtggaggagattctcaacgtggac
ccggtgcagcacacgtactcgtgcaaggttcgagtctggcggtacttgaagggcaaagac
atggtgacccaagagagcctgcttgacggtggcaacaaggtggtgattggcggctttgga
gaccccctcatctgtgacaaccaggtgtccactggggacaccaggatcttctttgtgaac
cctgcacccccatacctgtggccagcccataaaaatgagctgatgctcaattccagcctc
atgcgcatcaccctgcggaatctggaggaagtggagcactgtgtagaagacaaacctggg
acccacttcacaccagcgccccccacgcctccagatgcatgccgaggaatgctgtgtggc
ttcggcgccgtgtgccagcccagcgcagagggctccggccaagcctcctgcgtgtgcagg
aagagcgcctgccccgccctggtggcccccgtgtgcggttccgacgcctccacctacagc
agcgagtgcgagctgcggcgggcacagtgtacccggcagcgccgcatccgcctactcagc
cgtgggccctgcgggtcccgggacccctgctccaacgtgacatgcagctttggcagcacc
tgtgtgcgctcagcagacgggcacacagccacgtgcctgtgcccggccacctgccagggg
ccccccgacggccccgtgtgcggcagcgacggggcggactaccccagcgagtgccagctc
ctgcgccacgcgtgcgcccgccaggagaacgtcttcaagaagttcgacggcccttgtgac
ccctgccagggtgcccgcggtgacctgagccgtgtctgccgtgtgaacccacgcacgcgg
cgccccgagatgctcctgcggccggagagctgtcctcctcggcacgcacccgtgtgcggg
gatgacggggtcacctacgacaatgactgcataatgggccgcacgggcgctgcccgcggc
cttctcctccagaaagtgcgctctggccggtgccagcctcaagaccagtgcgcagacgtg
tgcaggttcggtgccgtgtgcctgtcccgccgaggccgtgctcgctgctcctgcgaccgc
gtcgtctgtgacggggcttaccggcccgtgtgcgcgctcgacgggcacacgtatgacagc
gactgctggcgccagcgggctgagtgtcagcagcagcgtgccgtccccgccaagcaccag
ggcccgtgtgaccagcccctgtccccgtgccttggggtgcagtgcccgtttggggcattg
tgtgctgtgaagaacggggaagcggagtgcgtgtgcctgcaggcatgttcgggcgtctac
gaccctgtgtgtggcagcgatggcgtcacgtacggcagcacgtgcgagctggaggccacg
gcctgcgcccttggacgggagatccgggtggcccgcagaggaccctgtgaccgctgcggg
cagtgccgctttggagctctgtgtgaggccgagagtgggcgctgcgtgtgcccctccgag
tgcgtggcctcggctcagcccgtgtgcggttctgatgggcacacgtacgccagcgagtgt
gagctgcacgtccacgcctgcacacagcagatcagcctgcacgtggtctcagccggccac
tgccaggcctgcggggacacggtgtgcgccttcggggcggtgtgctcggccgggcggtgc
gtgtgtccccggtgcgagcggcccccacccggccccgtgtgcggcagcgacggtgtcacc
tacgacagtgcctgtcacctccgggaggcagcctgccggcagcagatgcacatccaggag
gcccgggcggggccctgtgagcaggctgagtgcggctctgggggctctggctctggagag
gacggtgagtgtgagcaggagctgtgccggcagcgtggcggtgtctgggatgaggactcg
gaggacgggccctgcgtctgtgacttcagctgccacggcgtcctgcggagcccggtgtgt
ggctcggatggggtcacctacggcaccgagtgtgagctgaagaaggccaggtgtgagtcg
cagcgagaactgtacgtcacagctcagggagcctgccgcggccccaccttggccccgctg
ccacccgcagcccccccgcactgcacccagaccccctacggctgctgccaggacaacatc
actgcggcccggggtgtgggcctggccggctgccccagctcctgccattgcaacccgcat
ggctcctacagtggaacctgtgacccagccacgggtcagtgctcctgccgcccgggcgtc
gggggcctcaagtgtgaccgctgtgagcctggcttctggaacttccgtggcattgtcact
gatggccggagcggctgcaccccctgcagctgtgacccccggggcgccgtgcgggacgac
tgtgagcagatgaccgggctgtgctcgtgcaagcccggggtggccgggcccaagtgcggg
cagtgtccagaaggccacgccctgggccccggaggctgtgaaacagattccttggcgcct
gagacgtgtgctgagatgcgctgtgagtttggggcatcctgtgtggaggaggctggctcc
gcacactgtgtgtgcccaacatccacctgtccggaggccaatgctaccaaggtctgtggg
tcggacggagtgacctacggcaacgagtgccagctgaggaccatcgcctgccgccagggc
ttggacatctccatgcagagccttggcccgtgccgggactctgttcctcctgcagaggct
gctggtcctggtgcacccccaacacctggacccttggccacgtcagggctcaacgtgagc
aaggcgctgccatccccccccggcgccctgccccgggctcccagcagtacccctcccagc
cagcccacgcctcgaccctcaccggggccgtggacccctgccggcatccccaggacgacc
ccgaggcccgtgctgaccatgccccccacggccgctgccacggccagcctcgccacgtcg
gcctttggcgaatctggcagtgctgacgggagcggtgatgagggactgagcggtgacctg
gaggccagtgggactggctcagggggactcgagccccctgacggtggcagtgctgcgacc
cctgggccacccgtggagagggcttcttgctacaacgcacctttgggctgctgctcagac
ggcaagacgccctcgctggacacagagggttccaactgtcctgccaccaaggcgttccag
ggtgtgctggagcttgagggggtcgaggggcaagagctgttctacacaccggagatggcc
gaccccaagtcagagctttttggggagaccgctaggagcatcgagagcacactggatgac
ctcttccggaactcagatgttaagaaggacttccgaagtgtccgcctgcgggacttgggg
cctggcagctcagtccgagccattgtggacgtgcacttcgaccctgccacaacctttagg
gcgtctgatgtgggccaggccctgctccggcagatacaggcgtcccggcgccggtccctg
ggggtacggcggcccctgcaggagcacgtacgctttatggactttgactggtttcccgcg
ttcttcctgggagccaccacaggagctgcacctgctgcagccacggccagagcgaccact
atggcccacgtgccttctgctgtgacccagcgggccctctaccccagccacacaagccgg
cctgttggcaggaccacggccctgcccaccacacgccagccccccaccactgccccccgt
cgcgtgcctggacgccggcccttgccctcaggcccccagcagccgccaaagccctgtgac
tcccagccctgcctccacgggggaacctgccaagaccaggactcggctggaggcttcacc
tgcagctgcccagtgggcaggaggggtgccgtctgcgagaaggcactgcacccctctgtg
ccagccttcgggggccactccttcctggccttccccaccctccgtgcctaccacacactg
cgcctggcactggagttccgggcgctagagccccagggactcctactctataacggcaat
gcccggggcaaggacttcctggcactgactctgctggggggccgtgtgcagctccggttt
gacaccggctcagggcccgcagtactgaccagctcggtgcccatagagcccggccgctgg
taccacttggagctgtctcggcactggcgccggggctcgctctcagtggatggggagacc
cctgttctgggccatagccccagcgggactgatggtctcaacctggacacagacctcttt
gtgggcggcgtcccggcggaccaggctgccgtggtgctcgaaaggacctccattcgtgtt
ggcctcaggggctgcatccgcctgctggacgtcaataatcagcggttggagctcagcagc
tggcagggggctgtaacccgaagctccggtgtgggcgagtgcggggaccacccctgcctg
cccaacccctgcctcggcggggccccgtgccaggccctggaggctggcatgttccactgt
cagtgcccacctggccactttggtccaacctgtagcgttgacaagaacccctgtgagccc
aacccctgccatggggcagccccctgccgcgtgttgcctgagggggaggccaagtgcgaa
tgcccccagggacgggggggcaccatctgccagacagtctctgagcgggatcattcccag
cccttcctggctgacttcagcggcttctcctacctggagctaaaaggcttgcacaccttt
gagcgggacctaggggagaagatggtactggaggtggtgttcttggcgcgtggccccaac
ggcctgctcctcttcaacgggcagaagacagacggcaagggggacttcgtgtccctggcc
ttgcgtgaccgcttcctggagttccgctatgacctgggcaagggggcggcggtcatcagg
agcaaggagccagtggccctggacacctggaccagggtcttactggagcgcaacggccgc
aagggcgccatgcgggtcagtgacgggccgcgcgtgctgggggagtccccggtgccacac
actgtcctcaatctgaaggagccgctctatgtgggaggggcccctgacttcagcaagctg
gcccgggcagccgcagtgtcctctggcttcaacggcgtcatccagcgggtctccttgaaa
ggccaggagctgctgacccaggagcacgtggttcggtccgtggatgtgtcgtcttttgct
caccacccttgtacccaggcctcaggccacccgtgcctcaatggggcctcctgcctccct
cgggaggcctcctatgagtgcctgtgtcccgggggcttctccgggcttcactgcgagaag
gggctgattgagaagtcagcaggggatgtggacgccctggcctttgacggacaaacctac
atcgaatacctcaatgctgtgactgagagtgagaaggccctgcagggcaaccactttgag
ctgagtctgcgcacggaggccacccaggggctggtgctgtggagtggcaaggccacggag
cgggcagactacctcgcactggccatcgtggatgggcgcctgcagctgacctacgacttg
ggctcccagcccgtggtgctgcactccaccgtgccggtcaacaccaaccgctggttgcgg
gtcagggcacataggtggcctggagaagctgcccacgggccaggccctgcccaaggccta
cagcacaggctttgtgggctgcctgcaggacgtggtggtgggtcagcgcccgctgcacct
gctggaggatgctgtcaccaagccggagcttcggccctgcgccaccccatgagacacacc
acagcccaccacccaccctgtgtcattattttctatttttgtaaactcatggcttttttg
atatggttttcttgcctatgtgttggccagagggactgctggaccagcctccctaccgtc
caagcagacaagctacagagacaaacgggacttgcagggggagatgacgcgggcagcatg
gagggcttgactccagcggcagcctcaggatgtgtccctctgccttgggccactgtgtct
cagcccctcgtgctgggcctcccccgtgtgtccatccgtgctgggcctgtgtccccagag
caggaaggcactgctggggcttggggggggcccttcctccatgcaagccctcaggggcct
ttctgggttcccacctga
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