Neomonachus schauinslandi (Hawaiian monk seal): 110576276
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Entry
110576276 CDS
T08474
Symbol
TRAF6
Name
(RefSeq) TNF receptor-associated factor 6
KO
K03175
TNF receptor-associated factor 6 [EC:
2.3.2.27
]
Organism
nsu
Neomonachus schauinslandi (Hawaiian monk seal)
Pathway
nsu04010
MAPK signaling pathway
nsu04064
NF-kappa B signaling pathway
nsu04120
Ubiquitin mediated proteolysis
nsu04140
Autophagy - animal
nsu04144
Endocytosis
nsu04380
Osteoclast differentiation
nsu04620
Toll-like receptor signaling pathway
nsu04621
NOD-like receptor signaling pathway
nsu04622
RIG-I-like receptor signaling pathway
nsu04657
IL-17 signaling pathway
nsu04722
Neurotrophin signaling pathway
nsu04936
Alcoholic liver disease
nsu05132
Salmonella infection
nsu05133
Pertussis
nsu05135
Yersinia infection
nsu05140
Leishmaniasis
nsu05142
Chagas disease
nsu05145
Toxoplasmosis
nsu05152
Tuberculosis
nsu05160
Hepatitis C
nsu05161
Hepatitis B
nsu05162
Measles
nsu05168
Herpes simplex virus 1 infection
nsu05169
Epstein-Barr virus infection
nsu05170
Human immunodeficiency virus 1 infection
nsu05171
Coronavirus disease - COVID-19
nsu05200
Pathways in cancer
nsu05222
Small cell lung cancer
nsu05235
PD-L1 expression and PD-1 checkpoint pathway in cancer
nsu05417
Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
nsu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
110576276 (TRAF6)
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
110576276 (TRAF6)
04064 NF-kappa B signaling pathway
110576276 (TRAF6)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
110576276 (TRAF6)
04140 Autophagy - animal
110576276 (TRAF6)
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
110576276 (TRAF6)
04621 NOD-like receptor signaling pathway
110576276 (TRAF6)
04622 RIG-I-like receptor signaling pathway
110576276 (TRAF6)
04657 IL-17 signaling pathway
110576276 (TRAF6)
09156 Nervous system
04722 Neurotrophin signaling pathway
110576276 (TRAF6)
09158 Development and regeneration
04380 Osteoclast differentiation
110576276 (TRAF6)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
110576276 (TRAF6)
05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
110576276 (TRAF6)
09162 Cancer: specific types
05222 Small cell lung cancer
110576276 (TRAF6)
09172 Infectious disease: viral
05170 Human immunodeficiency virus 1 infection
110576276 (TRAF6)
05161 Hepatitis B
110576276 (TRAF6)
05160 Hepatitis C
110576276 (TRAF6)
05171 Coronavirus disease - COVID-19
110576276 (TRAF6)
05162 Measles
110576276 (TRAF6)
05168 Herpes simplex virus 1 infection
110576276 (TRAF6)
05169 Epstein-Barr virus infection
110576276 (TRAF6)
09171 Infectious disease: bacterial
05132 Salmonella infection
110576276 (TRAF6)
05135 Yersinia infection
110576276 (TRAF6)
05133 Pertussis
110576276 (TRAF6)
05152 Tuberculosis
110576276 (TRAF6)
09174 Infectious disease: parasitic
05145 Toxoplasmosis
110576276 (TRAF6)
05140 Leishmaniasis
110576276 (TRAF6)
05142 Chagas disease
110576276 (TRAF6)
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
110576276 (TRAF6)
09167 Endocrine and metabolic disease
04936 Alcoholic liver disease
110576276 (TRAF6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nsu04131
]
110576276 (TRAF6)
04121 Ubiquitin system [BR:
nsu04121
]
110576276 (TRAF6)
Enzymes [BR:
nsu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
110576276 (TRAF6)
Membrane trafficking [BR:
nsu04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
110576276 (TRAF6)
Ubiquitin system [BR:
nsu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRAF proteins
110576276 (TRAF6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAF-mep_MATH
MATH_2
zf-TRAF
TRAF6_Z2
zf-C3HC4_2
zf-C3HC4
zf-RING_UBOX
zf-RING_2
zf-C3HC4_3
zf-C3HC4_4
zf-TRAF_2
zf-RING_5
Sina_ZnF
SlyX
TRAF3_RING
RING_XB3-XBAT31
DUF16
U-box
zf-RING_11
DUF4455
DUF3450
Spc29
PspA_IM30
DUF7310
Med21
Laminin_II
UPF0242
ATG16
DUF1664
TMF_DNA_bd
Motif
Other DBs
NCBI-GeneID:
110576276
NCBI-ProteinID:
XP_021541054
UniProt:
A0A2Y9GUX0
LinkDB
All DBs
Position
11:23795555..23811994
Genome browser
AA seq
541 aa
AA seq
DB search
MSLLNCENSCGSGQSEGDCCGAMAGPCSAAAKDDSVGGTASPGNLSSSFMEEIQGYDVEF
DPPLESKYECPICLMALREAVQTPCGHRFCKACIIKSIRDAGHKCPVDNEILLENQLFPD
NFAKREILSLMVKCPNEGCLHKMELRHLEDHQVHCEFALMNCPQCQRPFQKCQLNIHILK
ECPRRQVSCVNCAALMAFEDKEIHDQNCPLANVICEYCNTMLIREQMPNHYDLDCPTAPI
PCTFSTFGCHVKMQRNHLARHLQENTQSHMRMLAQAVQGLSLALAPVPQRDMAPYDSSSV
SRVSTPCHPEVHNFQETIQQLEGRLVRQDHQIRELTAKMETQSMYVNELKRTIRTLEDKV
AEIEAQQCNGIYIWKIGNFGMHLKSQEEEKPVVIHSPGFYTGKPGYKLCMRLHLQLPTAQ
RCANYISLFVHTMQGEYDSHLPWPFQGTIRLAILDQSEAPVRQNHEEIMDAKPELLAFQR
PTIPRNPKGFGYVTFMHLEALRQRTFIKDDTLLVRCEVSTRFDMGSLRREGFQPRSTDSG
T
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atgagtctgctaaactgtgagaacagctgtggatccggccagtccgagggtgactgctgt
ggtgctatggccggcccgtgtagcgctgcagcaaaagatgacagtgtgggtggaaccgcc
agcccggggaacctgtccagctcctttatggaagagatccaggggtatgatgtggagttt
gacccacccctggaaagcaagtatgaatgccccatctgcttgatggcgttaagggaagca
gtgcaaacaccatgtggccacaggttctgcaaagcttgcatcatcaaatcaataagggat
gctggtcacaaatgtccagttgacaatgaaatattgctggaaaatcaactatttcctgac
aattttgcaaaacgagagattctttctttgatggtgaagtgtccaaatgaaggttgtttg
cacaagatggaactgaggcatcttgaggatcaccaagtacattgtgagtttgctctcatg
aattgtccccagtgccaacgtcccttccaaaaatgccaacttaatattcacattcttaag
gagtgcccgaggagacaggtttcttgcgtgaactgtgctgcgttgatggcatttgaagat
aaagagatccatgaccagaactgtcctttggcaaatgtcatctgtgaatactgcaatact
atgctcatcagagaacagatgcctaatcactatgatctagactgtccgacagccccaatt
ccatgcacattcagtacttttggttgccatgtaaagatgcagaggaatcacttggcacgc
cacctacaagagaatacccagtcacacatgagaatgttggctcaggccgttcagggttta
agccttgctttagctcctgtacctcagcgtgatatggcgccatacgattcttcctctgtg
tcccgggtctccactccgtgtcaccccgaggtccataatttccaagaaaccattcagcag
ttggagggtcgccttgtaagacaagaccatcaaatccgagagctaactgctaaaatggaa
actcagagcatgtatgtaaatgagctcaaacgaaccattagaacccttgaagacaaagtt
gctgaaatagaagcgcagcagtgcaacgggatctacatctggaagattggcaactttggg
atgcatttgaaatctcaggaagaggagaaacctgttgtcattcacagccctggattctac
acgggcaaacctggctacaaactgtgcatgcgcctgcacctccagttaccaactgctcag
cgctgtgctaattatatatccctctttgtccacacaatgcagggagagtatgacagccac
ctgccttggcccttccagggtacaatacgccttgcaattcttgatcagtctgaagcgcct
gtaaggcagaaccacgaagagatcatggatgccaaaccagagctgcttgccttccagaga
cccacaatcccacggaacccaaaaggttttggctatgtgacttttatgcacctggaagcc
ctaagacaaagaaccttcattaaggatgatactttgttagtacgctgtgaggtctctacc
cgctttgacatgggcagtctccggagggagggttttcagccacgaagtactgattcaggg
acatag
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integrated database retrieval system
