Neomonachus schauinslandi (Hawaiian monk seal): 110580959
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Entry
110580959 CDS
T08474
Symbol
CD4
Name
(RefSeq) T-cell surface glycoprotein CD4
KO
K06454
T-cell surface glycoprotein CD4
Organism
nsu
Neomonachus schauinslandi (Hawaiian monk seal)
Pathway
nsu03250
Viral life cycle - HIV-1
nsu03260
Virion - Human immunodeficiency virus
nsu04060
Cytokine-cytokine receptor interaction
nsu04514
Cell adhesion molecules
nsu04612
Antigen processing and presentation
nsu04640
Hematopoietic cell lineage
nsu04658
Th1 and Th2 cell differentiation
nsu04659
Th17 cell differentiation
nsu04660
T cell receptor signaling pathway
nsu05135
Yersinia infection
nsu05166
Human T-cell leukemia virus 1 infection
nsu05170
Human immunodeficiency virus 1 infection
nsu05235
PD-L1 expression and PD-1 checkpoint pathway in cancer
nsu05340
Primary immunodeficiency
Brite
KEGG Orthology (KO) [BR:
nsu00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
110580959 (CD4)
03260 Virion - Human immunodeficiency virus
110580959 (CD4)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
110580959 (CD4)
04514 Cell adhesion molecules
110580959 (CD4)
09150 Organismal Systems
09151 Immune system
04640 Hematopoietic cell lineage
110580959 (CD4)
04612 Antigen processing and presentation
110580959 (CD4)
04660 T cell receptor signaling pathway
110580959 (CD4)
04658 Th1 and Th2 cell differentiation
110580959 (CD4)
04659 Th17 cell differentiation
110580959 (CD4)
09160 Human Diseases
09161 Cancer: overview
05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
110580959 (CD4)
09172 Infectious disease: viral
05166 Human T-cell leukemia virus 1 infection
110580959 (CD4)
05170 Human immunodeficiency virus 1 infection
110580959 (CD4)
09171 Infectious disease: bacterial
05135 Yersinia infection
110580959 (CD4)
09163 Immune disease
05340 Primary immunodeficiency
110580959 (CD4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
nsu04090
]
110580959 (CD4)
CD molecules [BR:
nsu04090
]
Proteins
110580959 (CD4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CD4-extracel
C2-set
Tcell_CD4_C
Ig_3
ig
Ig_2
V-set
I-set
Pilin
Motif
Other DBs
NCBI-GeneID:
110580959
NCBI-ProteinID:
XP_021546333
UniProt:
A0A2Y9H3X9
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Position
5:complement(96247105..96288871)
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AA seq
462 aa
AA seq
DB search
MSRGAAFRHLLLVLQLAMLPTVPLGREVVLAKVGDTAELPCHAAPGKNIVFNWKHSSMLK
ILGRQGSFWLTGVSKLKHRVESKKNLWDQGSFPLIIKDLEVADSGVYFCEVEGKMQEVEL
LVFNLTAKWDTGSGGGSNIRLLQGQQLTLTVEGPSGSNPSVQWKGPGNKSKSSGQSLSLP
GLEPQESGTWTCTISQNQKTVVFNINILVLAFQKVSNTVYTKEGEQVEFSFPLNFKDENL
SGELRWRAEGAPSSLLWISFTLENKKLSVKEVHHPKLQMKTFLPLSFILPQALSQYAGSG
TLTLSLAKGTLQQEVNLVVMRVTKSQNNLTCEVLGPTSPELTLSLNLEEQAAKVSKQQKL
VSVVDPEGGTWQCLLSDKDKVLLASKVKVLSPVFTKAWPKLLAIVLGGILGLLLFIGLCI
FCCVKCWHRRRQAERMSQIKRLLSEKKTCQCSHRFQKTCNLI
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgagtcgaggggccgcttttaggcacctgctcctggtgctgcagttggcaatgctcccc
acggtccctctgggaagagaggtggtgttggcgaaggtgggagacacagcggaactgccc
tgccatgctgccccagggaagaacatagtcttcaactggaaacattcttccatgctcaag
attctggggcgtcagggctccttctggcttacaggtgtctccaagctgaagcatcgcgtc
gaatcgaaaaaaaacctgtgggaccaaggatcctttcctctgatcatcaaggatcttgaa
gtagcagactcaggagtttacttctgtgaggtagaaggcaagatgcaagaggtggagttg
ctggtgttcaacttgactgccaagtgggacaccggcagtggcggcggcagcaacatccgc
ctgctgcaagggcagcagctgaccctgaccgtggagggcccctctggtagtaacccctcc
gtgcaatggaaaggtccagggaataaaagcaagagcagtggccaaagcctctcactgcct
gggctggagccgcaggagagcggtacctggacatgcaccatctcccagaaccagaagaca
gtggtgttcaacataaacatcttggtgctggctttccagaaggtctctaacacagtctat
acaaaagaaggggagcaggtggagttctcctttccgcttaacttcaaagatgaaaacctg
agtggggagctgaggtggcgggcagagggggctccctcctccctgctctggatctccttc
accttggagaacaagaagctatctgtgaaagaggtccaccaccccaaactccagatgaag
acttttctcccgctcagctttatcctgccccaggctttgtctcagtatgctggttctgga
accctgaccctgagtcttgccaaggggacattgcagcaggaagtgaatcttgtggtgatg
agagtgactaagtctcagaacaatttgacctgtgaggtgctgggacccacctcccctgag
ctgactctgagcttgaatctggaagagcaggctgccaaggtctcaaagcagcagaagctg
gtatcggtggtggaccctgaggggggaacatggcagtgtctattgagtgacaaggacaaa
gtcctgctggcctccaaggtcaaggttttgtccccagtgttcaccaaggcctggccaaag
ctcttggccattgtgctgggtgggatcttaggccttctgcttttcattgggctctgcatc
ttctgctgtgttaagtgctggcaccgcaggcgccaggcagagcggatgtctcagatcaag
agactcctcagtgagaagaagacctgccagtgctcccaccggttccagaagacatgcaat
ctcatttga
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