Neomonachus schauinslandi (Hawaiian monk seal): 110582062
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Entry
110582062 CDS
T08474
Symbol
TRPC6
Name
(RefSeq) short transient receptor potential channel 6
KO
K04969
transient receptor potential cation channel subfamily C member 6
Organism
nsu
Neomonachus schauinslandi (Hawaiian monk seal)
Pathway
nsu04022
cGMP-PKG signaling pathway
nsu04360
Axon guidance
Brite
KEGG Orthology (KO) [BR:
nsu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04022 cGMP-PKG signaling pathway
110582062 (TRPC6)
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
110582062 (TRPC6)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
nsu04040
]
110582062 (TRPC6)
Ion channels [BR:
nsu04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
110582062 (TRPC6)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRP_2
Ion_trans
PKD_channel
Ank_2
Ank
Ank_4
Ank_5
Motif
Other DBs
NCBI-GeneID:
110582062
NCBI-ProteinID:
XP_044775363
UniProt:
A0A8M1MRN4
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Position
11:110905859..111022071
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AA seq
932 aa
AA seq
DB search
MNQSPVFAPRRGGSPRRAAGAGARRNESQDYLLLDSEPGEDCCPQPPRPAYGYYPCLRDT
DNRLAHRRQTILREKGRRLANRGPAYMFNDRSTSLSAEEERFLDAAEYGNIPVVRKMLEE
SLSLNVNCVDYMGQNALQLAVANEHLEITELLLKKENLSRVGDALLLAISKGYVRIVEAI
LSHPAFAEGKRLATSPSQSELQQDDFYAYDEDGTRFSHDVTPIILAAHCQEYEIVHTLLR
KGARIERPHDYFCKCSECNQKQKHDSFSHSRSRINAYKGLASPAYLSLSSEDPVMTALEL
SNELAVLANIEKEFKNDYKKLSMQCKDFVVGLLDLCRNTEEVEAILNGDVEVCHSGGDHG
RPNLSRLKLAIKYEVKKFVAHPNCQQQLLSIWYENLSGLRQQTMAVKFLVVLGVAVGLPF
LALIYWFAPCSKMGKIMRGPFMKFVAHAASFTIFLGLLVMNAADRFEGTKLLPNETSTDN
AKQLFRMKTSCFSWMEMLIISWVIGMIWAECKEIWTEGPKEYLFELWNMLDFGMLAIFAA
SFIARFMAFWHASKAQRIIDANDTLKDLTKVTLGDNVKYYNLARIKWDPSDPQIISEGLY
AIAVVLSFSRIAYILPANESFGPLQISLGRTVKDIFKFMVIFIMVFVAFMIGMFNLYSYY
IGAKQNEAFTTVEESFKTLFWAIFGLSEVKSVVINYNHKFIENIGYVLYGVYNVTMVIVL
LNMLIAMINSSFQEIEDDADVEWKFARAKLWFSYFEEGRTLPVPFNLVPSPKSLFYLLLR
LKKWISEMFQGHKKGFQEDAEMNKRNEEKKFGILGSHEDLSKLSLDKKQLGHSKQSSVRS
SEDFQLNSFNNPPRQYQKIMKRLIKRYVLQAQVDRESDEVNEGELKEIKQDISSLRYELL
EEKTQNSEDLAELIRKLEEKLSMEPNQEESNR
NT seq
2799 nt
NT seq
+upstream
nt +downstream
nt
atgaaccagagcccggtgttcgcgccccgcaggggcggctctccccggcgggcggctgga
gccggcgcgcggcgcaacgagagccaggactacctgctcttggactcggagcccggagag
gactgctgccctcagcccccgcggccggcctacggctactacccctgcctccgagacacc
gacaataggctggcccaccggcggcagacgattctccgcgagaaggggagaaggttagct
aaccggggaccagcatacatgtttaatgatcgctcaacaagcttatctgctgaggaggaa
cgttttttagatgctgctgaatatggcaacatcccggtggtgaggaagatgttggaagaa
agtctctcgctgaatgtcaactgtgtggattacatgggccagaatgccctgcagttggca
gtggccaatgagcatctggaaatcacagaactgcttctcaagaaagaaaacctgtctcgc
gttggggacgccttgcttctcgctattagtaaaggttacgttcggattgtggaagccatt
ctcagtcatccagcttttgcagaaggcaagaggctagccaccagccccagccagtctgaa
ctccagcaagacgacttttatgcctatgatgaagacgggacacggttctctcatgatgtg
acgcccatcattctggctgcccactgccaggaatacgaaatcgtgcacaccctcttgcgg
aaaggcgctcggattgaacggcctcacgattacttctgcaagtgcagtgagtgcaaccag
aaacagaagcacgactccttcagtcactccagatcgaggattaatgcctacaagggcctg
gcaagtccagcttacctgtcactgtctagcgaggacccagtcatgactgctttagagctg
agcaacgagctggcggtgctggccaacattgagaaagagttcaagaatgactacaaaaaa
ctgtcaatgcagtgcaaagattttgttgttggactccttgatctgtgcagaaatactgaa
gaagtggaggccatcctgaatggggacgttgaagtgtgccacagtgggggagatcacggt
cgtccaaatctcagccgtctaaaactagccattaaatatgaagtaaaaaaatttgtagct
catccaaactgtcagcagcagcttctgtccatctggtatgagaacctgtccggtctacgg
cagcagacgatggcggtgaagtttctggtggtcctcggggtagctgtcggattgcccttc
ctggctctcatctactggtttgctccatgcagcaagatggggaagattatgcgaggacca
ttcatgaagtttgtagcacacgctgcgtcctttaccatttttctgggactgctagtcatg
aacgcagctgacagatttgaaggcaccaaactccttcctaatgaaaccagcacagataat
gcaaaacagctgttcaggatgaaaacatcctgcttctcgtggatggagatgctcattata
tcctgggtaataggcatgatatgggccgaatgtaaagaaatttggacggaaggccccaag
gaatacttgtttgagttgtggaatatgcttgattttggtatgttagcgatctttgcggca
tcattcattgcaagattcatggcattttggcatgcttccaaagcccagcgcatcattgat
gcaaatgatactctgaaggacttgaccaaagtcacactgggagacaatgtgaaatattac
aatttggccaggatcaagtgggacccctctgatcctcaaatcatatctgaaggtctttat
gcaattgctgtagttctgagtttctcaagaatagcttatattttaccagccaacgaaagc
tttggacctctgcagatatcgcttgggagaacagtgaaggacatcttcaagttcatggtc
atattcatcatggtgtttgtggccttcatgattgggatgttcaacctctactcctactac
attggtgcaaaacaaaatgaagctttcacaacagtggaggagagttttaagacactgttc
tgggctatctttggactttctgaagtgaagtcagtggtcatcaactataatcacaaattc
attgaaaacattggttatgttctttatggagtctataatgtcacaatggtcattgttttg
ctcaatatgctaattgcaatgatcaacagttccttccaggaaattgaggatgatgctgat
gtggaatggaaatttgcaagggccaaactttggttttcctactttgaggagggaagaact
ctacctgttcctttcaacctggtgccaagtccaaagtccctgttttatctcttactgaga
cttaaaaaatggatttctgagatgttccagggccataagaaaggtttccaggaggatgca
gagatgaacaagagaaatgaagaaaagaaattcggaattttgggaagtcatgaagacctt
tcaaaattatcacttgacaaaaaacagcttgggcatagtaaacaatcaagtgtgaggagc
tcagaagatttccagttaaacagtttcaataatcctcccagacaatatcagaaaattatg
aagaggctcattaaaagatacgtactacaagcccaggtagatagagagagtgacgaagtg
aatgaaggggaactgaaggaaattaaacaggacatctcaagcctccgctatgaactcctt
gaagaaaaaactcagaattcagaagacctagcagaacttattagaaaacttgaggagaaa
ttatcaatggaaccaaatcaagaggaaagcaatagataa
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