Neomonachus schauinslandi (Hawaiian monk seal): 110584557
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Entry
110584557 CDS
T08474
Symbol
SMCR8
Name
(RefSeq) guanine nucleotide exchange protein SMCR8
KO
K23611
guanine nucleotide exchange protein SMCR8
Organism
nsu
Neomonachus schauinslandi (Hawaiian monk seal)
Pathway
nsu04140
Autophagy - animal
nsu05014
Amyotrophic lateral sclerosis
nsu05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
nsu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
110584557 (SMCR8)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
110584557 (SMCR8)
05022 Pathways of neurodegeneration - multiple diseases
110584557 (SMCR8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nsu04131
]
110584557 (SMCR8)
Membrane trafficking [BR:
nsu04131
]
Autophagy
Other autophagy associated proteins
Rab associated proteins
110584557 (SMCR8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Folliculin
Motif
Other DBs
NCBI-GeneID:
110584557
NCBI-ProteinID:
XP_021550318
UniProt:
A0A2Y9HEX1
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Position
15:complement(11150912..11160063)
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AA seq
937 aa
AA seq
DB search
MISAPDVVAFTKEEEYEKEPYNEPALPEEYSVPLFPFASQGANPWSKLSGAKFSRDFILI
SEFSEQVGPQPLLTIPNDIKVFGTFDLNYFSLRIMSVDYQASFVGHPPGSAYPKLNFVED
SKVVLGDSKEGAFAYVHHLTLYDLEARGFVRPFCMAYISADQHKIMQQFQELSAEFSKAS
ECLKTGNRKAFAGELEKKLKDLDYTRTVLHTETEIQKKANDKGFYSSQAIEKANELASVE
KSIIEHQDLLKQIRSYPHRKLKGSPLCSGETEHTQDQASQAATTSNPDESADTDLYTCRP
AYTPKLIKAKSTKCFDKKLKTLEELCDTEYFTQTLAQLSHIEHMFRGDLCYLLTSQIDRA
LLKQQHITNFLFEDFVEVDDRVAEKQESAPPRPVPGRPPSRSLEECPIPQVLVSVGSYKS
SVESVPIKMEQELGDEEYREAEVTESSSFDPQENLDYLDMDMKGSISSGESIEVLGTEKS
TAVLPKSDSQASLTVPLSPQVVRSKAVSHRTISEDSIEVLSTCPSEALIPDDFKASCPSA
INEEESYADDSEGAIHFQASVSPPELGEAEEGSLETPPSQIDSSCCIGKESDSLRVPLSP
PAHTPSEQDGVVSIPPQRYRQKDQGFRVDFAVENASPSRDNSPEGFPADELDPNRLLASR
DVSKTSLDNYSDTTSNMSSVASTSSDRTPSSAHPTGPSSERHKKRAGQNALKFIRQYPFA
HPAIYSLLSGRTLVVLGEDEAVVRKLVTALSIFVPSHSHFAKPVKHWVSSPLHITDFQKW
KLIGLQRVAPPAGAGALHTLGRYSRYTSVLDLDSKALRCPLYRGALVPRLADHRTQIKRG
STYYLHVQSTLTQLCSKAFLYAFCHHLHLPAHDKETREVVAGRQASFLKLNLGLVNEDVK
VVQYLAELLKLHYTQEAPGTSQPTLRFDYVPSFLYKI
NT seq
2814 nt
NT seq
+upstream
nt +downstream
nt
atgatcagcgcccctgacgtggtggccttcaccaaagaggaggagtacgagaaggagcct
tacaatgagcccgccttgcccgaggagtactcggtgccactcttccccttcgccagccag
ggagccaacccatggtccaaactgtccggggccaagttctctcgggacttcatccttatt
tccgagttctccgagcaggtgggaccccaacccttgttgaccatccccaatgacatcaaa
gtttttggtactttcgatctcaattacttctccttgcggatcatgtctgtggattaccag
gcctcctttgtgggccatccgcctggttctgcctaccccaagctgaactttgtggaggac
tccaaggtggtgctgggagactccaaggagggagcctttgcgtatgtgcaccaccttacc
ctgtacgacctggaggcccggggctttgtgaggcccttttgcatggcttatatctcagcg
gaccagcacaaaatcatgcagcagtttcaggagctctcagctgaattttccaaagcttct
gagtgcttgaagacaggcaacaggaaggcatttgcgggagaacttgaaaaaaaactgaaa
gacttggattacaccaggacagtgctgcacacggaaacggagatccagaagaaggccaat
gacaaaggcttttactcatctcaggcaattgagaaagccaatgaactggctagtgtagag
aagtccatcattgaacatcaagacctgctgaagcagatccgctcgtaccctcatcggaag
ttgaaggggtctcctttgtgttctggggagacggagcacacccaggatcaggccagccag
gcagccactacctctaaccctgatgagtctgctgacacagacctttacacctgcagacct
gcttataccccgaaactcatcaaagcaaagtccaccaagtgttttgacaagaagttgaag
accttggaagagctctgtgacactgagtatttcacccagaccctggctcagctcagccac
atagagcacatgttcagaggagacctgtgctacctcctgaccagccagattgacagagca
cttctaaaacaacagcatataacaaacttcctctttgaagattttgtggaggtcgacgac
agggtggcagagaaacaagagagcgcaccccctaggcccgttccaggcaggccgccttct
aggtctctggaagaatgtccgattcctcaagtgttagttagcgttggttcctacaagtcc
agtgtggagtctgtgccgatcaagatggagcaggaacttggagatgaggagtacagggaa
gcggaggtgacagaatcgagcagttttgacccccaggagaacttggactacctggatatg
gatatgaaagggagcatcagcagtggcgaaagcatcgaggttctgggcacggagaagtcc
accgctgtgctgcctaagtctgacagccaggccagcctcacggtgccattgagcccccag
gtggtccggagcaaagcggtcagccacaggaccatcagcgaggacagtattgaagtcctc
agcacctgcccctcggaggccctcatccccgatgattttaaggccagctgcccaagtgcc
attaacgaagaagaatcatatgcagatgatagcgagggagccatccacttccaggcaagc
gtcagcccgccggagctgggtgaagcagaggagggcagcttagaaacgcccccgtcacaa
atagactcctcctgctgcattgggaaggagagtgacagtctgcgggtgcccctctcccct
ccagcccacaccccctcggagcaggacggagtagtgagcatccctccacagcgctacagg
cagaaggaccaggggttccgtgtggactttgccgtggaaaatgccagcccttcccgagac
aacagtcccgaaggcttccctgctgatgagctggatccaaaccgcctgctggcaagccgg
gatgtcagtaagaccagcctggacaactactcggacactaccagcaacatgagcagtgta
gcctccaccagctcagacaggactccctcttctgctcaccccaccggcccctcttccgag
aggcataaaaagagggctggccagaacgccttaaaattcatccgtcagtacccctttgcc
cacccggccatctactccttgctcagcgggaggactcttgtggtcctaggggaggatgag
gccgtagtgaggaagctggtgacagcgctgtccatctttgtccccagccacagccatttc
gccaagccggtgaagcactgggtctcctctcctttgcatatcacggattttcagaagtgg
aagcttatcggcctgcagagggtggcgccccccgccggtgccggcgcgctgcacaccctg
ggccgctacagccgctacacgagcgtcctggacctggacagcaaagcgctccgctgcccc
ctctacaggggcgccctggtgccccggctggccgaccaccgcactcagatcaagcggggc
agcacctactacctgcacgtccagagcacgctcacccagctctgctccaaggccttcctc
tacgccttctgccaccacctgcacctgcccgcgcacgacaaggagacccgggaggtggtt
gccggccgccaggcgagcttcctgaagctgaacctgggcctggtgaacgaagatgtgaag
gtggtccagtacctggccgagctgctgaagctgcactacacgcaggaggctcccgggacc
agccagcccacactcaggttcgactacgtccccagcttcttgtacaagatctga
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