Neomonachus schauinslandi (Hawaiian monk seal): 110587425
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Entry
110587425 CDS
T08474
Symbol
LTBP1
Name
(RefSeq) latent-transforming growth factor beta-binding protein 1 isoform X2
KO
K19559
latent transforming growth factor beta binding protein 1
Organism
nsu
Neomonachus schauinslandi (Hawaiian monk seal)
Pathway
nsu04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
nsu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
110587425 (LTBP1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
nsu04990
]
110587425 (LTBP1)
Domain-containing proteins not elsewhere classified [BR:
nsu04990
]
EGF-like domain-containing proteins
hEGF / cEGF domain-containing proteins
110587425 (LTBP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_CA
cEGF
TB
EGF
hEGF
EGF_3
FXa_inhibition
EGF_MSP1_1
Plasmod_Pvs28
EGF_TEN
EGF_2
Motif
Other DBs
NCBI-GeneID:
110587425
NCBI-ProteinID:
XP_021553348
UniProt:
A0A2Y9HNN5
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All DBs
Position
10:26338588..26689581
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AA seq
1393 aa
AA seq
DB search
MDTKLMCLLFFFSLPPLLVSNHTGRIKVVFTPSICRVTCTKGSCQNSCEKGNTTTLISEN
GHAADTLTATNFRVVICHLPCMNGGQCSSRDKCQCPPNFTGKLCQIPVHGASMPKLYQHS
QQSGKALGTHVVHSTHTLPLTMTSQQGVKVKFPPNIVNIHVKHPPEASVQIHQVSRIDGP
TGQKAKEAQPGQSQISYQGLPVQKTQTVHSTYSHQQVIPHVYPVAAKTQLGRCFQETIGS
QCGKALPGLSKQEDCCGTVGTSWGFNKCQKCPKKPSYHGYNQMMECLQGYKRVNNTFCQD
INECQLQGVCPNGECLNTMGSYRCTCKMGFGPDPTFSSCVPDTPVISEEKGPCYRLVSSG
RQCMHPLSVHLTKQLCCCSVGKAWGPHCEKCPLPGTAAFKEICPGGMGYTVSGVHRRRPI
HHHVGKGPVFVKPKNTQPVAKSTHPPPLPAKEEPVEALTFSQEHGPGVAEPEVATAPPEK
EIPSLDQEKTRVEPGQPQLSPGISTIHLHPQFPVVIEKTSPPVPVEVAPEASTSSASQVI
APTQVTEINECTVNPDICGAGHCINLPVRYTCICYEGYKFSEQQRKCVDIDECTQVQQLC
SQGRCENTEGSFLCICPAGFMASEEGTNCVDVDECLRPDVCGEGHCVNTAGAFRCEYCDS
GYRMTRGGHCEDIDECLTASTCPDEQCVNSPGSYQCVPCTEGFRGWNGQCLDVDECLEPQ
VCTNGTCSNLEGSYMCSCHKGYTPTPDHKHCKDIDECQQGNLCMNGQCKNTEGSFRCTCG
QGYQLSAAKDQCEDIDECQHHHLCSNGQCRNTEGSFLCVCDRGYRASALGDHCEDINECL
EDNSVCQGGDCINTEGSYDCTCPDGFQLNDNKGCQDINECEQPGLCGPHGECLNTESSFH
CVCEQGFSISADGHTCEDIDECVNNTVCDSHGFCDNTAGSFRCLCYQGFQAPQDGQGCVD
VNECELLSGVCGEAFCENVEGSFLCVCADENQEYSPMTGQCRSRASGDLDEDQPKEEKKE
CYYNLNDASLCDNVLAPNVTKQECCCTSGAGWGDNCEIFPCPVVGTAEFTEMCPRGKGFV
PTGESSYEMGGENYKDADECMLFGQEICKNGFCLNTQPGYECYCKQGTYYDPVKLQCFDM
DECQDPNSCIDGQCVNTEGSYNCFCTHPMVLDASEKRCIRPTESHEQIEETDVYQDLCWE
HLSEEYVCSRPLVGKQTTYTECCCLYGEAWGMQCALCPMKDSDDYAQLCNIPVTGRRRPY
GRDALVDFSEQYAPEADPYFIQDRFLNSFEELQAEECGILNGCENGRCVRVQEGYTCDCF
DGYHLDMAKMTCVDVNECDELNNRMSLCKNAKCINTEGSYKCLCLPGYVPSDKPNYCTPL
NTALNLEKDSDLE
NT seq
4182 nt
NT seq
+upstream
nt +downstream
nt
atggatactaagctgatgtgtttgttgttctttttctccctgcctccgctcctagtgagt
aaccacactggccgcatcaaggtggtctttactccgagcatctgtagagtgacctgcacc
aagggcagctgtcagaacagctgtgagaaggggaacaccaccactctcattagtgagaat
ggtcatgctgccgacaccctgacggccacgaacttccgagtggtcatttgccatcttcca
tgtatgaatggcggccagtgcagttcaagggacaaatgccagtgccctccaaatttcaca
gggaagctttgtcagatcccagtccatggtgccagcatgccgaagctgtatcagcattcc
cagcagtcaggcaaggcattgggaacgcatgtagtccactccacacataccttgcctctg
accatgactagccaacaaggagtcaaagtgaaatttcctcccaacatagtcaatatccat
gtgaagcaccctcctgaggcttcagtccagatacatcaggtttcaagaatcgatggccca
acaggccagaaggcaaaggaagctcaaccaggccaatcccaaatctcttaccaagggctt
cccgtccagaagacccagacagtacattccacatactcccaccagcaagtcatcccccat
gtctatcctgtggccgctaagacgcagcttggccggtgcttccaggaaaccattgggtca
cagtgtggcaaggcgctccctggcctttcaaagcaggaggactgctgtggaactgtgggt
acctcctggggctttaacaaatgccagaaatgccccaagaagccatcttatcatggatat
aaccaaatgatggaatgtctacaaggttataagcgggttaacaacaccttttgtcaagat
attaatgaatgccagctacagggcgtgtgccctaatggtgagtgtttgaataccatgggc
agctatagatgcacctgcaaaatgggatttgggccggatcccaccttttcaagttgtgtt
ccggatacccctgtgatctctgaagagaaggggccctgttatcgtcttgtcagttccgga
aggcagtgtatgcaccctctgtctgttcacctcaccaagcagctctgctgttgtagtgtg
ggcaaggcctggggcccacactgtgagaaatgtccccttccaggcacagctgcttttaag
gaaatctgtcctggtggaatgggttatacggtttctggcgttcatagacgcaggccaatc
catcaccatgtaggtaaaggacctgtatttgtcaagccaaagaacactcaacctgttgct
aaaagtactcatcctccacctctcccagccaaggaagagccagtggaggccctgaccttc
tcccaggaacacgggccaggagtggcggagccagaagtggcaactgcaccccctgagaag
gaaataccttcattggatcaagagaaaaccagagttgagcctggtcaaccccagctctct
ccaggcatctcaactattcatctgcacccacagtttccagtagtgattgaaaaaacatca
cctcctgtgcctgtggaagtagctcctgaagcttctacatcaagtgccagccaagtgatt
gcacctactcaagtaacagaaatcaatgaatgtactgtgaaccccgatatctgtggagca
ggacactgcattaacctgcccgtgaggtatacctgtatatgctatgagggctacaagttc
agtgagcaacagaggaaatgtgttgatatcgatgaatgcactcaggtccagcagctctgc
tcccagggacgctgtgaaaacacagagggaagtttcttgtgtatttgcccagcaggattt
atggccagtgaggagggtaccaactgcgtagacgttgacgagtgcctgaggccagatgtg
tgcggggaagggcactgcgtcaataccgcgggggccttccggtgcgaatactgcgacagc
ggttaccgcatgacccggggaggccattgcgaggatattgacgaatgcttgactgcaagc
acttgtccagatgagcagtgtgtgaactctcctgggtcttaccagtgtgttccctgcaca
gaagggttccgaggttggaatgggcagtgtcttgatgtggatgaatgcctggaaccacag
gtctgcacaaacggtacttgctccaaccttgaaggctcctacatgtgttcatgccacaag
ggttataccccgacaccagaccataagcactgcaaagatattgatgagtgtcagcaaggg
aatctgtgcatgaatgggcagtgcaaaaacacggagggctccttcaggtgtacctgtggg
caggggtaccagctatcagcggcgaaagaccagtgtgaagatattgatgaatgtcagcac
catcatctctgcagtaatggacagtgcaggaacacagagggctctttcctctgtgtttgt
gaccgaggttacagagcatccgcccttggggaccactgtgaagatatcaacgaatgcttg
gaggacaacagtgtttgccaaggaggagactgcattaacactgaagggtcatatgattgt
acttgtccagatggattccagctaaatgacaataaaggatgtcaagatattaatgaatgt
gaacagcccggactctgtggtcctcatggagagtgtctcaacacagaaagttcttttcac
tgtgtctgtgaacagggtttctcaatttctgcagatggccatacgtgtgaagatattgat
gaatgtgtaaacaacactgtttgtgacagtcacgggttttgtgacaatacggctggctcc
ttccgctgcctctgttatcagggctttcaggccccacaggatgggcaagggtgtgtggat
gtgaacgaatgcgagctgcttagtggggtgtgtggtgaagccttctgtgaaaatgtggaa
gggtccttcctctgtgtgtgcgctgatgaaaaccaggagtacagccccatgaccgggcag
tgccgctcccgggcctcgggagacttagatgaagatcaacccaaggaagaaaagaaagaa
tgctactataatctcaacgacgccagtctctgtgataatgtgctggcccccaacgtcacc
aaacaggaatgctgctgcacctctggggccgggtggggagacaactgtgagatcttccct
tgccctgtcgtggggactgctgaattcactgaaatgtgtcctagagggaaaggttttgtc
cccactggagaatcctcttacgagatgggtggtgagaactataaagatgcggacgaatgc
atgctctttgggcaagaaatctgcaaaaatggcttctgtctgaacactcagcctggttac
gaatgctactgtaagcaggggacatactatgaccccgtcaaactgcagtgctttgatatg
gatgaatgtcaggaccccaatagttgtattgatggccagtgcgttaatacagaaggctct
tataactgcttctgtacccatccaatggttctggatgcttcagagaaaagatgtatacga
ccaactgaatcacacgaacaaatagaggaaactgatgtctaccaagatctgtgctgggaa
catctgagtgaggagtatgtgtgcagccggcccctcgtgggcaagcagacgacttacacg
gagtgttgctgtttgtatggagaggcctggggtatgcaatgtgccctctgccccatgaag
gactcagacgactatgcccagctgtgtaacatccccgtcacgggacgccggcgcccatat
ggacgggatgccttggtcgacttcagcgaacagtatgctccagaagctgatccctacttt
attcaggaccgttttttaaatagctttgaggagttgcaggctgaggaatgtggcatcctc
aatgggtgtgagaatggccgttgcgtgagggtgcaggagggttacacctgtgactgcttc
gatgggtatcacttggacatggccaagatgacctgtgttgatgtaaacgaatgtgatgag
ttgaacaaccggatgtctctctgcaagaatgccaagtgcatcaacaccgaaggctcctac
aagtgcctatgtctgcctggctacgtaccttctgacaaacccaactactgcactccgttg
aataccgccttgaatttagaaaaagacagtgatctggagtaa
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