Nicotiana sylvestris (wood tobacco): 104211948
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Entry
104211948 CDS
T05026
Name
(RefSeq) isoleucine--tRNA ligase, cytoplasmic
KO
K01870
isoleucyl-tRNA synthetase [EC:
6.1.1.5
]
Organism
nsy
Nicotiana sylvestris (wood tobacco)
Pathway
nsy00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
nsy00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
104211948
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
nsy01007
]
104211948
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
nsy03016
]
104211948
Enzymes [BR:
nsy01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.5 isoleucine---tRNA ligase
104211948
Amino acid related enzymes [BR:
nsy01007
]
Aminoacyl-tRNA synthetase
Class I (U)
104211948
Transfer RNA biogenesis [BR:
nsy03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
104211948
Prokaryotic type
Other AARSs
104211948
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
DUF5915
tRNA-synt_1g
tRNA-synt_1e
Motif
Other DBs
NCBI-GeneID:
104211948
NCBI-ProteinID:
XP_009759400
UniProt:
A0A1U7VC65
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All DBs
Position
5:complement(180975119..180993937)
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AA seq
1182 aa
AA seq
DB search
MEDVCEGKDFSFPNQEEKILQWWDSVKAFETQLEKTKNQPEYIFYDGPPFATGLPHYGHI
LAGTIKDIVTRYQSMTGHHVTRRFGWDCHGLPVEHEIDEKLGIKTKNQVIEMGIDKYNEE
CRAIVTRYVGEWEKTVVRMGRWIDFQNGYKTMDLKFMESVWWVFAQLFQKGLVYRGFKVM
PYSTGLKTPLSNFEANSNYKEVSDPEIMVSFPIVDDPEGASFVAWTTTPWTLPSNLALCV
NANFVYVKVRNKFNGKIYVVAESRLAELPVEKAKKVTPNGPAADTQNPNSKSKPSGGKSQ
NVETYEVVDKFSGSSLVGKKYIPLFDYFKDFSDTAFRVVADDYVTSDSGTGIVHCAPAFG
EDDYRVCIGNHIIKKGESLIVAVDDNGYFTDRITDFRGKYVKEADNDITQAVKEKGRLVK
SGKFMHSYPFCWRSDTPLIYRAVPSWFIMVEKIKDQLLENNKQTYWVPDFVKEKRFHNWL
ENARDWAVSRSRFWGTPLPVWISEDGEEIVVMDSIDKLEKLSGAKVTDLHRHNIDHITIP
SSRGPDFGVLRRVEDVFDCWFESGSMPYAYIHYPFENVELFENNFPGHFVAEGLDQTRGW
FYTLMVLSTALFGKPAFRNLICNGLVLAEDGKKMSKRLKNYPQPSEVINDYGADALRLYL
INSPVVRAEPLRFKKDGVFAVVKDVFLPWYNAYRFLVQNAKRLEIDGFGPFIPTDQKTLQ
SSSNVLDQWINSATQSLVHFVRQEMDAYRLYTVVPYLLKFLDNLTNIYVRFNRKRLKGRT
GEGDCRTALSTLYYVLLTSCKAMAPLTPFFTEVLYQNLRKVCKGSEESIHYCSYPEVEGK
RWERIEQSVNRMMTIIDLARNIRERHNKPLKTPLREMVVVHPDSEFLDDIAGKLREFVLE
ELNIKSLVPCNDTLKYASLRAEPDFSVLGKRLGKSMGVVSKEVKAMSTEDIIAFEKAGEI
TVASHTLKLSDIKIVRGFKRPDNRKENEMDAAGDGDVLVILDLRTDDSLFEAGVAREVVN
RIQKLRKKAALEPTDLVEVFFKSLDEDKTVSQQILESQESYIRDALGSPLLPADLIPSHA
MTIDEESFHGISSLSFVITLARPSLVFNSDAITALYGGNTQYSQGLQTYLLMRDHHNLKS
EFQQGKGKITVKCIENQPPVEVFLGKHVFLSVGDYFLNRKSQ
NT seq
3549 nt
NT seq
+upstream
nt +downstream
nt
atggaagacgtctgcgaaggcaaagatttcagctttccaaatcaagaagagaaaattctc
caatggtgggattcagtaaaagcattcgaaactcagctcgaaaaaaccaaaaatcaaccc
gaatacatcttctacgacggtccgccatttgcgacgggtttgcctcattacgggcatatt
ttagccggtacaattaaggacattgtgacccggtaccaatccatgacgggtcatcatgtg
acccgaagattcggttgggattgtcacgggttacccgttgaacacgaaattgacgagaaa
cttgggattaagactaaaaaccaagtgattgaaatgggaattgataagtataatgaggag
tgcagagctattgttacgaggtatgttggggaatgggagaagacagtggtgagaatgggg
aggtggattgattttcagaacgggtataaaactatggatttgaagttcatggagagtgtt
tggtgggtctttgctcagttgtttcaaaagggtcttgtttatagaggtttcaaggttatg
ccttatagtactggtttgaagactccattatccaattttgaagctaattctaattataag
gaagtaagtgaccctgaaatcatggtttccttcccgatagttgatgatcccgagggtgcg
tcctttgtggcatggacaacaactccttggacccttcctagtaatcttgctctttgtgtc
aacgccaattttgtatatgtcaaggttcgcaacaaattcaatgggaagatttatgtggtg
gcagaatctcgattggccgagctaccagttgagaaggcgaaaaaggtcaccccaaatgga
cctgctgctgacactcaaaatccaaattctaagtcaaagccttctggtggtaaatcacag
aatgtcgaaacttatgaggtggtggataaattctctgggtcgtcccttgtggggaagaag
tatattccactatttgattacttcaaggatttttctgacacagcattcagagtcgttgcg
gatgattatgtgacttctgacagtggtactggaattgttcattgtgctcctgcctttggt
gaggacgattatcgtgtttgtattggaaatcacataataaaaaagggggagagcctgatt
gtggcggtagatgataatggctactttactgatagaattacagacttcagaggaaaatat
gttaaggaggcagataatgatatcactcaagcagtgaaggagaaaggaaggcttgtcaaa
tctggaaagtttatgcattcataccctttttgctggagatctgacacacctctgatttac
agagcagttcctagctggtttattatggtggaaaaaattaaggatcaattgctagagaac
aataaacaaacctactgggttcctgattttgtgaaggaaaaacgcttccacaattggtta
gaaaatgcaagagactgggctgttagccgaagtaggttctggggtactcctcttcctgtg
tggattagcgaggatggtgaggagatagttgttatggactccattgacaaactggaaaag
ctttctggtgctaaggtgacagacttgcatcgtcacaacattgatcacattacaattccg
tccagtcgggggcctgatttcggcgttcttcgacgtgtggaggatgtatttgattgctgg
tttgagagtgggtcaatgccttatgcttatatccactatccttttgagaatgttgaactc
ttcgagaacaatttccctggtcattttgtggcagaaggtctcgatcaaactcgtggatgg
ttctacacccttatggtcctttctactgccctttttgggaaacctgcttttagaaacctc
atttgcaatggtcttgtcctggctgaggatgggaagaagatgagtaaacgattaaagaac
tatcctcaaccatcagaagttatcaacgattatggagctgatgcattacgtttatacctg
ataaactctcccgttgtccgtgctgaacctctgcgttttaagaaagacggagtttttgct
gtggtgaaagatgttttcttgccatggtacaatgcatataggttccttgttcagaatgca
aaaagacttgaaattgatgggtttggaccattcattcccactgatcaaaaaactttgcag
agttcatccaatgtcctagatcaatggatcaattctgcaactcagagcttagtgcatttc
gtccggcaggaaatggatgcttatagattgtacacggtggttccgtatctcctaaaattt
cttgataatttaacgaatatctatgtgcggttcaatcggaagaggctaaaaggccgtact
ggtgagggggattgcagaactgctctttcaactctgtactatgtgcttttgacttcatgt
aaagcaatggcaccgttaactccttttttcactgaggttctttaccaaaacttgcggaaa
gtttgcaaaggatcagaggagagcattcactattgcagctatcctgaagtggaaggaaag
aggtgggagcgtattgagcagagtgttaataggatgatgacaattattgaccttgcacgg
aatattcgtgagcgtcacaataagcctcttaaaaccccgctcagggaaatggtggttgta
catccagattcagaattccttgatgatattgcgggcaaacttagagagtttgtgctcgag
gagctaaacattaagtctttggtcccatgcaatgacacgttgaagtatgcttctttgcgc
gcagagccagatttcagtgtgttaggaaaaaggctgggaaagtcgatgggagttgtttcc
aaggaagttaaggccatgtcaacagaagatattattgcttttgagaaagcgggagaaatt
actgtcgcttcacacactttgaagcttagtgatatcaagattgttcggggtttcaagcgt
cctgataataggaaagagaatgaaatggatgcggcaggggacggtgatgttttagtgata
ctggatttgcgtactgatgattcactgtttgaggctggagttgctcgggaggttgtgaat
aggatacagaaactgagaaagaaagccgcgcttgaacccactgacttggtagaggtcttc
ttcaaatctttggacgaggataaaacagtctctcagcagattttggagtcccaggaatca
tatattagagatgcccttgggtctcctttgcttcctgccgacctgatcccatcacatgca
atgacaattgatgaagagagtttccatggaatctccagcttgtcgtttgtgattacgtta
gcaagaccaagtctagtgtttaattcagatgccatcactgctttatatggaggaaacaca
cagtattctcaaggcttacaaacatacctgctgatgagggatcaccataacttgaagtca
gagtttcaacaaggaaagggcaagataacagtaaagtgcattgagaatcagcctccagtt
gaggtgtttctgggaaagcatgtcttcttgagtgttggagattatttcttgaacaggaaa
tcacagtaa
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