Nicotiana sylvestris (wood tobacco): 104213333
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Entry
104213333 CDS
T05026
Name
(RefSeq) nuclear pore complex protein GP210
KO
K14314
nuclear pore complex protein Nup210
Organism
nsy
Nicotiana sylvestris (wood tobacco)
Pathway
nsy03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
nsy00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
104213333
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nsy03019
]
104213333
Messenger RNA biogenesis [BR:
nsy03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
104213333
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_GP210_15th
Ig_GP210_16th
Big_2
Ig_NUP210_7th
Ig_NUP210_5th
Ig_NUP210_1st
Ig_NUP210_16th
Ig_NUP210_2nd
Ig_NUP210_3rd
Ig_NUP210_15th
Ig_NUP210_4th
Motif
Other DBs
NCBI-GeneID:
104213333
NCBI-ProteinID:
XP_009761122
UniProt:
A0A1U7UYL8
LinkDB
All DBs
Position
2:50706657..50715028
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AA seq
1944 aa
AA seq
DB search
MLLHFLSLLLLLFPLATPFPATGPHIADVNILLPPKMTHPVEYRLQGSDGCFKWTWDHHD
ILAVLPEYNVSSQCSTSARLKSIAPYSGRKETAVYATDVHTGAVIRCKVYVDNFSRIQIF
HSSVKLDLDGLATLRVRAFDSEENVFSSLVGIQFTWHLMPETDGLPHHLTHIPLKDSPLS
DCGGLCGDLDIQIKLENSGVFSDLYVVKGTEIGHEIVSVHLDEPSVKYMEDKIVLTVAEA
ISLEPPSPVCVLIGAIVHYSLKVIRGNIPQLVTLPSAFHRWSVSNSSVAQVDRMVGTAKA
LNLGITTVTVEDTRVVGHTQVSSFHVVLPDSLSLYMLPLSLSGDHVKGIEPIPSVARWYV
VSGREYLIQVRIFSKGTWVQEVYISENDDVKLHGDSSEIWSIIPSSNRIGEKGVSRILKA
LSCGLGKLTATLTYCTGHEETKEVLKVVQEVMVCDQVKFSMEGVSDSITLPWAPGVYQEL
ELKVTGGCAMVSGDYRWFSSDMSIVSVSASGIVQAKRPGKVTIKAVSVFDSLNYDEIVVE
VSLPSLMIVLPNFPVETPVGSYLRAAVTFKTLDGDLFYKCDAFSPSIKWKTGSDAFLIVD
AGETFISEKQEILPIDTEKYGPPCAWTYVYASNSGQTMLHATLSKEFQQYDHYTGGSVVL
QATSRIAAFMPLIVHPASDGNQFGGYWFNLVQAEADDHLDNMEHLYLAPGTYFDVMLRGG
PNRWDQGVEFVESVESLDEHNLRVQDGLLVSQEFTSYGSTYRIKCQDVGNFRLLLKRGNL
IGEGHPLPAVSEVQLSLTCGFPASIALIADETVNSVEVIQFAAQADRGSGRIRTTPITIA
NGRTVRLSAVGISESGIAFGNSSSLPLKWELKDCDDLAFWDDIHNLAMLSNWERYLVLAN
ATGLCVVRATVIGPVDLVSHRHSLKHIPGPENDLTDAIRLQLVSSLRVYPEFSLLYLNHD
ARLNLSITGGSCFIDAAVNDTQVMEITQPAPGLQCTQLLLAPKKLGTALVTVRDVGLAPP
LSAFSVVQVADVDWIKIKSGEELSIMEGSSLSINFLAGVNDGNTFDSSQYVYMNIRVHIE
DHIVELVNEDDLSCCDDGYVIVPNFRIRAMRLGITTLYVSARQHTGHEILSQPIKVEVYA
PPRIHPSDIFLVPGASYVLTVRGGPKTGAYIKFVSMDNEVAKVHTATGRVSATSPGNSTI
AAKIYRNGDIFICQAYGEVKVGVPSSAMLNVQSEQLAVGRQIPIFPSLSEGNLFSFYELC
RNYKWAIDDEEVLSFQAADDLHGGKNGMLLSSEKGNGLAGYVGDKDLGFIRVLHGRSAGQ
TDVTVSFSCDFVARKSFSQSRLYTASISLSVVPELPLALGSPITWILPPHYTTSDLLPSA
SKTFSKGDPSMGKVTYSILGDCRRKGEREEDDPILIDGSRIRTKESGNLACIQAKDRSNG
RVEVASCVKVAEVTQVRFTSEKLLVHTLAIGAEIDVPIKYYDVLGNPFHEAHDVFLFGVE
TNYRDVISVEDAVDGNGNVHLRAISHGRALVRVGFANDLEKSDYVVILVGAHLHPQDPTF
HLGSGLNFSIEGLNDQVSGQWFSSNTSIVSVDQLSGHAKAIGEGSARIIFESLNMKLQTT
VTVSQPEMMSVDAPREVLTNVPLPANGYSFHVKLNDAHGHKYKSAKNRAIFLFDCLVDPP
YVGYVKPWVDLDTGSSYCLFFPYSPEHLVLATPKSGDTRLDLAVTIKASLIGEQNISGSA
SALFVGGFIILGTEGDSLQLNLTPEYNKSVLTVVGNTDVNIYWHDQERLAIRPIYGEDSQ
GGSRAQYEVKIRRAEKFKDKLIFTLPATGQRMEVNVCYEPEERRATSANLNLWSAAAVCF
ILMIFTATLFICYLDQPVRSRPTAPPGTPRVAAPATPERSSPAVVNEHSPRTPQPFLDYV
RRTIDETPYYRQDFRRRANPQNTY
NT seq
5835 nt
NT seq
+upstream
nt +downstream
nt
atgttgctccactttctttcactgcttcttctgcttttccctttggctacgccttttccg
gcgactggtcctcacattgcggacgtcaacatactgttgcctcccaaaatgactcaccct
gttgagtatagacttcaaggtagtgatggttgcttcaaatggacatgggatcatcatgat
attttggctgtgctgcctgagtacaatgtcagtagccaatgctctacaagtgcccgcttg
aaatcaattgccccttatagtggtcgaaaggagactgctgtctatgcgacagatgtgcat
actggagctgtgattcgatgcaaagtttatgttgacaacttctctaggatccagattttc
catagctccgtcaaacttgaccttgatggccttgctactttacgtgtccgtgcctttgat
agtgaagagaatgttttctcgtctttggtgggcatacaattcacgtggcacctaatgcct
gaaactgatggattacctcatcacctaacacatatccctttgaaggactctccattgagt
gattgtgggggattatgtggtgaccttgatatccaaataaagcttgaaaatagcggcgtg
ttttctgatctctatgtggtaaagggcacggaaatcggccatgaaatagtgtctgttcat
ttggatgaaccatcagttaaatatatggaagataaaattgtcctaactgtggcagaagcc
atatctctggaacctccttcgccggtttgtgtccttattggtgctattgttcattatagt
cttaaagttatccgtgggaatattccacaacttgttactctgccatctgcctttcaccga
tggtctgtttcaaactcctcagttgctcaggtagacaggatggtgggtactgccaaggct
ttgaacttgggtataacaacggtaactgttgaagatactagggtggttggccatacacaa
gtgtcttctttccacgttgtcctaccagattctttatctttgtatatgttacctctatct
ctttctggtgatcatgtaaagggaattgaaccaataccctctgtggcacgctggtatgta
gtttctggtcgggaatatctcattcaagtaaggattttctcgaaaggaacatgggtacaa
gaagtttacatttcagaaaatgatgatgttaagttgcatggtgactcatcagaaatctgg
agtattattccctcatccaatcgcattggagagaaaggggtatccagaatcctaaaagct
ctttcgtgtggtctgggaaaattgactgcgactctcacatattgcactgggcacgaagaa
acaaaggaagttctcaaggttgttcaagaagttatggtttgtgaccaggtgaagttcagc
atggaaggtgtctctgacagtattactcttccttgggcacctggtgtttatcaagagttg
gagctaaaggttactgggggctgtgcaatggtgtctggtgactacagatggttctcttct
gatatgtctattgtgtcagtatctgcttctgggattgtccaggcaaaaagacctggaaaa
gtgactataaaggcagtctcagtttttgattctcttaattatgatgagatagttgttgaa
gtgagtttgccttctttaatgatagtactgcctaattttccggtggagactcctgtaggt
tcatatcttcgagctgctgtgacgtttaaaacattggatggtgacttattctacaaatgt
gatgcttttagcccatccattaagtggaaaactggcagtgacgctttccttattgtggat
gctggtgagacctttatttctgaaaagcaagaaattcttccaattgatacagagaaatat
ggtcctccatgtgcatggacttatgtctatgcttctaattctggtcagacgatgctacat
gcaacattgtcaaaagaatttcaacagtatgatcactatactggcggttctgttgttctg
caagcaacttcgcgtattgcagcttttatgccgctcatcgtgcacccggctagtgatgga
aaccagtttggtggttactggtttaatttggttcaggctgaagctgatgatcacttggac
aatatggagcatctatatcttgcccctggaacatattttgatgtgatgcttcgtggagga
cctaatcgatgggaccagggagttgaatttgttgaatccgtggagagtttggatgaacac
aatctcagggttcaagatgggcttctagttagtcaagaatttaccagctatgggagcaca
tacagaatcaagtgccaagatgttggaaactttaggcttcttttgaaacgtgggaattta
attggagagggtcatcctttgcctgctgtatctgaagtgcaattatcactcacatgtggt
ttcccggcctctatagcattaatagctgatgaaactgttaattccgttgaagtgatccag
tttgcagctcaggctgaccgtggcagtggaaggattcgtactaccccaatcacaatagca
aatgggcgcacagttcgactatcagcagttggcattagtgagtctggaatagcgtttgga
aactcatcttctcttcctttgaagtgggagcttaaagattgtgatgatctggcattttgg
gatgatatccacaacttagcaatgttatcaaattgggagaggtacttggtcttggcaaat
gcaactggactatgtgttgtacgagcaaccgttattggacctgttgatttggttagccat
cgtcattctcttaaacacattccaggccctgagaatgatctaacagatgctatacgcttg
caacttgtttcatccttaagggtctatccagaattcagcttgttgtatctcaatcatgat
gccaggttgaatctgtcaattactggaggaagttgtttcattgatgctgcagtaaatgat
acgcaagttatggaaataactcagcctgctccaggtttacagtgtacacaattactactg
gctcctaagaagctgggaactgcacttgtaacggttcgagacgttgggcttgctccacct
ctttccgctttctctgtggttcaagttgcagatgtggactggattaagattaaatctgga
gaagaattgagcattatggaagggagttcactgtcaatcaattttcttgctggagtaaat
gatgggaacacttttgattcttcgcagtatgtttacatgaatattcgtgttcatattgag
gatcatatagttgaacttgtcaatgaagatgatctttcctgttgtgatgatggatatgtg
attgtgcctaacttcagaataagggcaatgcgtcttgggatcaccacactgtatgtcagc
gctagacaacatactggccatgagatactgagtcagccaattaaggtagaagtctatgca
ccacctagaattcatcctagtgatattttccttgtaccaggtgcttcttacgttcttact
gtcagaggaggcccaaaaactggtgcgtatatcaagttcgtcagtatggataatgaggtt
gctaaggtccatacagccacaggacgagtttctgcaacatcaccaggaaacagtaccata
gctgccaagatatacaggaatggagatatctttatttgtcaggcatatggtgaagttaaa
gtaggtgttccttcttcagctatgttaaatgttcaaagtgagcagctagctgttggccgt
caaataccaatatttccctccctgtctgagggaaatttattttcattttatgaactttgc
agaaattataagtgggctatagatgatgaagaggtgttgagtttccaagcagcagacgac
ttacatggtggaaaaaatggaatgctcttgtccagtgaaaaaggcaatgggctggcagga
tacgtgggtgataaagaccttggttttattcgagtattgcatggaagatctgcggggcag
acagatgttacagtttctttctcctgtgattttgttgctcgtaaatctttttcacagtca
agattatatactgcatctatttccttgtcggtagtgcctgagcttccccttgcgctcggg
tcaccaattacttggattctccctccacattataccacgtctgatcttttgccttcagct
tctaaaactttcagtaaaggggatccaagtatgggtaaggttacttattctatactggga
gactgtagaagaaagggtgaaagggaggaagatgatcctatactcattgatgggagcaga
ataagaacaaaagagagtggcaatcttgcatgtattcaagcaaaagataggtcaaatgga
agagttgaggtagcatcttgtgtgaaggttgctgaagtgactcaagtacgtttcacgtca
gaaaagttgctggttcacacattagcgataggtgctgaaattgatgttccgatcaaatat
tatgatgtgcttgggaatcctttccacgaggctcatgatgtatttctttttggagttgaa
actaactaccgtgatgtcatctctgtcgaggatgcagttgatggcaatggaaatgtccat
ctcagagcaatcagtcatggtagagctcttgtgcgagtaggttttgccaatgacctggag
aagtctgattatgtggtgattctcgttggtgctcatttgcatcctcaggatccaaccttt
cacctagggagtggtcttaacttcagcatagaaggtctaaatgatcaggtatctggtcag
tggtttagtagtaatacaagcattgtgtctgtggaccagctatctggacatgccaaggcg
ataggggaaggttctgcacgaattatctttgagagtttaaatatgaaactgcaaactaca
gttacagtgtctcagccagagatgatgtctgttgatgctccaagagaggtgctgacaaac
gtgccgcttccagcaaatggatatagctttcatgtgaaacttaatgatgctcatggccac
aagtataaatctgctaaaaacagggcaattttcttgtttgattgcctggttgatccacct
tatgttggatacgtgaagccatgggttgatcttgatactggtagttcgtattgccttttc
ttcccttactctccagaacatttggtacttgccactccaaagtcaggagacactagactg
gatttagctgttaccataaaggcatcgctcataggagagcagaatatctcaggatctgct
tcagcactttttgttggaggcttcatcattctgggaacagaaggagattcattgcagtta
aatctaaccccagaatataacaagagtgtcctaactgtcgtaggaaacacggatgtgaat
atctactggcatgatcaggaacggctagctatcagaccaatatatggggaagattcgcaa
ggaggaagccgtgcacagtacgaggtcaaaattcgcagagcagagaaatttaaagacaaa
ctgatttttacactcccagccactggtcagaggatggaagttaatgtttgctatgaaccc
gaagagagaagagcaacatctgctaatcttaatttatggtccgctgctgctgtgtgtttc
attttgatgatattcacagctactttattcatttgttacttggaccaacctgtgagatcc
cgaccaactgctcctcctggcacgccaagggtagctgcacctgcaactcctgagcggagc
agtcctgctgtagtaaacgagcattctcctcggacacctcagcctttcttggattatgtt
aggaggacaattgatgaaaccccatactacagacaagattttaggaggagagctaatcct
cagaatacttactag
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integrated database retrieval system
