KEGG   Nicotiana sylvestris (wood tobacco): 104219090
Entry
104219090         CDS       T05026                                 
Name
(RefSeq) switch 2 isoform X1
  KO
K20098  DNA excision repair protein ERCC-6-like 2 [EC:5.6.2.-]
Organism
nsy  Nicotiana sylvestris (wood tobacco)
Brite
KEGG Orthology (KO) [BR:nsy00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:nsy03400]
    104219090
DNA repair and recombination proteins [BR:nsy03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   Helicases
    104219090
SSDB
Motif
Pfam: SNF2-rel_dom Helicase_C DEAD ResIII ERCC3_RAD25_C RHH_ERCC6L2 HDA2-3 Protamine-3 SWI2_SNF2
Other DBs
NCBI-GeneID: 104219090
NCBI-ProteinID: XP_070006543
UniProt: A0ACM5YS33
LinkDB
Position
7:48480006..48486561
AA seq 895 aa
MSWNSFKETLKPCTTIQSSFSQSSSISSYNFDTNSVNPRKPPKSSLSQQLLRLEDRSSLP
QTQPPQTPNKQNHFDLKSKYEKSEEEEEEGEEEEEKPVGFGRPKLDPLLLNQTGPYEPLV
LSSSGQKPVVQVPASINCRLLEHQRAGVKFLYSLYQNNHGGVLGDDMGLGKTIQSIAFLA
AVFGKDGDLPESTVSKEHPRTRGPVLIVCPSSLIHNWVNEFSKWATFSVCIYHGPNRDLM
IDKLEARGVEILITSFDTYRIHGHILSDVDWEIVIIDEAHRLKNEKSKLYKACLAIKTLK
RYGLTGTIMQNKLMELFNLFDWVIPGCLGTREHFREFYDEPLKHGQRSSAPDRFVRVADE
RKQHLVSVLHKYLLRRIKEETIGHLMLGKEDNVVFCAMSELQKRVYQRMLQLPEVRCLIN
KDLPCSCGSPLKQVECCRRTVPDGIIWSYLHRDNPDGCDSCPYCVVLPCLMKLQQISNHL
ELIKPNPRDDPDKQRKDAEFADAVFGKDIDLVGGHTQNKSFLGLSNVEHCGKMRALEKLM
SSWVSQGDKILLFSYSVRMLDILEKFIIRKGYGFSRLDGSTPTGLRQSLVDDFNSSPSKQ
VFLISTKAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQRRHVVVFRLLAAGSL
EELVYTRQVYKQQLSNIAVSGKMEKRYFEGVQDCKEFQGELFGICNLFRDLSDKLFTSEI
IELHEKKRKEDGTHSKQDLSGMYFVPEKEITTASLVAPESSKHKEDEGTAVAPMLEHLGI
VYAHRFEDIVDLGPAMMKEKKEHTVHLSNAPGQPKCSTVGKRKSDAITGKENVGTGNPIK
MRKKNHFSLIACFMGMEEVQFSKWLLSATPAEREKVLKDYHKRRKDKIHDFNDNL
NT seq 2688 nt   +upstreamnt  +downstreamnt
atgtcttggaacagcttcaaggagacactcaagccctgcactacaattcaatcatctttc
tcacaatcttcttcaataagttcttacaatttcgacacaaattctgtaaaccctagaaaa
ccccctaaatcttctttgtcccagcaacttctacgcctcgaagatcgttcttctttgcct
caaacccaaccaccacaaactcccaataagcagaaccattttgatttgaaaagcaaatat
gaaaaatcagaggaggaggaagaagaaggagaagaagaagaagaaaagcccgttgggttt
gggaggcccaaattggatcctttattgctaaatcaaacaggaccttacgagcctttggtt
ctgtcttcatcgggtcaaaagcccgttgttcaggttccagcatctataaactgtaggctt
ttggagcatcaacgagcaggagtgaaatttttgtatagcttgtatcagaataatcatgga
ggagttcttggagatgatatgggacttggtaaaaccatccaaagcattgcattcttagct
gctgtatttggtaaggatggagacttacctgaatcaacagtctcgaaggaacacccaaga
acaaggggccctgtactaatagtttgtccctcttctttgatccacaactgggtaaatgag
ttttccaagtgggcaacatttagtgtttgcatttatcacgggccaaaccgtgatttaatg
attgacaaactagaagcacgtggagtggagatacttataaccagttttgatacatacaga
atccatggacacattttatcagatgttgattgggagattgtgattattgatgaggctcat
cggcttaagaatgagaaatcaaaactgtacaaggcatgtttagcaattaagaccctaaaa
cgttatggtcttacaggaacaataatgcagaataaattaatggaattgttcaacctgttc
gactgggtgatacccggttgcttggggacacgtgaacacttccgagaattttacgatgag
ccccttaaacatggtcagcgatcaagtgctccagatagatttgttcgagttgctgatgag
cgaaaacagcacttagtatcagttctgcacaaatatttgttaagaaggataaaggaggaa
actattggacatctcatgttggggaaggaagataatgttgtattttgtgcaatgagtgaa
ctgcaaaaacgggtttatcagagaatgctacagttacctgaggtacgatgccttatcaat
aaggatctcccttgtagttgtggaagccctctcaagcaagtcgaatgttgcagaaggacg
gttccagatggtatcatctggtcttaccttcacagggacaatccagatggttgtgattca
tgcccttattgtgtagttcttccttgtctcatgaagctccagcagataagcaatcacttg
gagcttatcaagcctaatccaagggatgatccagataaacagagaaaagatgcagaattt
gctgatgctgtatttggtaaggacattgatttggtaggagggcatactcagaataagagt
ttcttgggcttaagtaatgttgaacattgcgggaaaatgagagcattggagaaactaatg
tcctcttgggtttcacaaggtgacaagattcttcttttcagctattctgtaaggatgctg
gacatacttgagaaatttattatacgcaaaggctatggcttttcaaggcttgatggttcc
accccaactggcctgcgccagtctctagtcgacgacttcaactctagtcctagcaaacag
gtgttccttatatcaacaaaagctggtggacttggccttaacctcgttagtgcaaatcgt
gtagtgatatttgatccaaattggaatcctgcccaagatttgcaggcccaggacagatca
ttccgatttggacagaggcggcatgttgttgttttccgcctacttgcggctggttctctt
gaagaacttgtttacactcgtcaggtctacaaacagcagttatcaaacattgctgtctct
ggaaaaatggaaaaacgctatttcgagggagttcaggattgtaaggagtttcaaggggag
ctattcggtatctgcaatcttttcagagatctatctgacaaactcttcacaagtgagatc
attgaattacatgaaaagaagagaaaggaagatggtactcattcaaaacaggatttgagt
gggatgtattttgttcctgagaaagaaataactacagcatctttggtggcacctgaaagc
agtaaacataaagaagatgagggcacagcagttgctccaatgcttgaacacctcggtatt
gtatatgctcatcggtttgaagacattgttgaccttggaccagcaatgatgaaagagaaa
aaagaacacactgtgcatctaagtaacgctccagggcagccaaagtgttcaaccgttggg
aagaggaaatcagatgccataactgggaaggagaatgtaggaactggcaatcctataaag
atgcggaaaaagaaccattttagcctcattgcctgtttcatgggcatggaagaggttcag
tttagcaaatggctcttatctgcaactccagcagagcgtgaaaaagtactaaaagattat
cataagaggcgaaaggacaaaattcatgactttaatgacaacttgtaa

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