Nicotiana sylvestris (wood tobacco): 104222971
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Entry
104222971 CDS
T05026
Name
(RefSeq) uncharacterized protein
KO
K11086
small nuclear ribonucleoprotein B and B'
Organism
nsy
Nicotiana sylvestris (wood tobacco)
Pathway
nsy03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
nsy00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104222971
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nsy03019
]
104222971
03041 Spliceosome [BR:
nsy03041
]
104222971
03032 DNA replication proteins [BR:
nsy03032
]
104222971
Messenger RNA biogenesis [BR:
nsy03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
104222971
Spliceosome [BR:
nsy03041
]
Complex A
U1 snRNP components
Sm proteins
104222971
U2 snRNP components
104222971
Complex B
U1 snRNP components
104222971
U4/U6.U5 tri-snRNP components
104222971
Complex C
U2 snRNP components
104222971
DNA replication proteins [BR:
nsy03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
104222971
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
104222971
NCBI-ProteinID:
XP_009772618
UniProt:
A0A1U7WD94
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All DBs
Position
1:complement(159277002..159280736)
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AA seq
276 aa
AA seq
DB search
MSMSKSSKMLQYINYRMRVTIQDGRQLIGKFMAFDRHMNLVLGDCEEFRKLPPTKGSKEE
REDRRTLGLVLLRGEEVISMTVEGPPPPDESRVKSTAAGSAVPGPGLGRAAGRGVPTGPL
VHAQPGLAGPVRGVGGPAPGMMQPQISRPPMPNVSAPPMNYPPPVMRPPGGGPPMQMQMQ
RPGGPPPPMAPPPQFRPGGGPPQFPPQFGQRPMVPPPPMMRGPPPPGAPPRPGMPGGPPG
QPPRPGMPPPPPGGQVPVYGPPRPGMPPPPNQQNQQ
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatgtcgaagagttccaaaatgcttcaatacatcaattaccgtatgcgtgtaaca
atccaagacggccgtcaattgatcggaaaattcatggctttcgaccgacacatgaacctc
gtgcttggcgactgtgaagagttccgcaaacttcctccgacaaaaggatccaaagaagaa
cgtgaagaccggcgtacacttggtctcgtacttctccgtggtgaagaggttatttcaatg
actgttgagggcccacctcctcctgatgaatcccgggttaagtctactgctgccggttct
gctgttcccggcccggggctcggtcgggctgctggtcgtggtgttcctactgggccttta
gttcatgctcagcctggacttgctgggcctgttcgtggtgttggtgggcctgctcctggt
atgatgcagcctcaaatttcccggcctccgatgccgaatgtctctgctcccccaatgaat
tacccgccgccggtgatgaggccgcctggtggtggcccaccaatgcaaatgcagatgcag
agacctgggggtccaccaccgcctatggcgcctccaccacagttcaggcctggtggtggc
ccaccacagttcccgccgcagtttggtcagcggccaatggttcctccgcctcccatgatg
aggggcccacctccacctggtgctccacctcgaccaggaatgcctggtggtcctcctggt
caaccgcctcgcccgggtatgccacccccgcctcctggcggtcaggttcctgtttatggg
cctcctcgtcctggtatgcctccaccacctaatcagcagaatcagcagtaa
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