KEGG   Nicotiana sylvestris (wood tobacco): 104222971
Entry
104222971         CDS       T05026                                 
Name
(RefSeq) uncharacterized protein
  KO
K11086  small nuclear ribonucleoprotein B and B'
Organism
nsy  Nicotiana sylvestris (wood tobacco)
Pathway
nsy03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:nsy00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    104222971
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:nsy03019]
    104222971
   03041 Spliceosome [BR:nsy03041]
    104222971
   03032 DNA replication proteins [BR:nsy03032]
    104222971
Messenger RNA biogenesis [BR:nsy03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    U7-dependent histone pre-mRNA processing factors
     104222971
Spliceosome [BR:nsy03041]
 Complex A
  U1 snRNP components
   Sm proteins
    104222971
  U2 snRNP components
    104222971
 Complex B
  U1 snRNP components
    104222971
  U4/U6.U5 tri-snRNP components
    104222971
 Complex C
  U2 snRNP components
    104222971
DNA replication proteins [BR:nsy03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Telomerase complex (fungi)
    Sm core complex
     104222971
SSDB
Motif
Pfam: LSM
Other DBs
NCBI-GeneID: 104222971
NCBI-ProteinID: XP_009772618
UniProt: A0A1U7WD94
LinkDB
Position
1:complement(159277002..159280736)
AA seq 276 aa
MSMSKSSKMLQYINYRMRVTIQDGRQLIGKFMAFDRHMNLVLGDCEEFRKLPPTKGSKEE
REDRRTLGLVLLRGEEVISMTVEGPPPPDESRVKSTAAGSAVPGPGLGRAAGRGVPTGPL
VHAQPGLAGPVRGVGGPAPGMMQPQISRPPMPNVSAPPMNYPPPVMRPPGGGPPMQMQMQ
RPGGPPPPMAPPPQFRPGGGPPQFPPQFGQRPMVPPPPMMRGPPPPGAPPRPGMPGGPPG
QPPRPGMPPPPPGGQVPVYGPPRPGMPPPPNQQNQQ
NT seq 831 nt   +upstreamnt  +downstreamnt
atgtcgatgtcgaagagttccaaaatgcttcaatacatcaattaccgtatgcgtgtaaca
atccaagacggccgtcaattgatcggaaaattcatggctttcgaccgacacatgaacctc
gtgcttggcgactgtgaagagttccgcaaacttcctccgacaaaaggatccaaagaagaa
cgtgaagaccggcgtacacttggtctcgtacttctccgtggtgaagaggttatttcaatg
actgttgagggcccacctcctcctgatgaatcccgggttaagtctactgctgccggttct
gctgttcccggcccggggctcggtcgggctgctggtcgtggtgttcctactgggccttta
gttcatgctcagcctggacttgctgggcctgttcgtggtgttggtgggcctgctcctggt
atgatgcagcctcaaatttcccggcctccgatgccgaatgtctctgctcccccaatgaat
tacccgccgccggtgatgaggccgcctggtggtggcccaccaatgcaaatgcagatgcag
agacctgggggtccaccaccgcctatggcgcctccaccacagttcaggcctggtggtggc
ccaccacagttcccgccgcagtttggtcagcggccaatggttcctccgcctcccatgatg
aggggcccacctccacctggtgctccacctcgaccaggaatgcctggtggtcctcctggt
caaccgcctcgcccgggtatgccacccccgcctcctggcggtcaggttcctgtttatggg
cctcctcgtcctggtatgcctccaccacctaatcagcagaatcagcagtaa

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