Nicotiana sylvestris (wood tobacco): 104224933
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Entry
104224933 CDS
T05026
Name
(RefSeq) transcription factor PIF3-like isoform X1
KO
K12126
phytochrome-interacting factor 3
Organism
nsy
Nicotiana sylvestris (wood tobacco)
Pathway
nsy04075
Plant hormone signal transduction
nsy04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
nsy00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
104224933
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
104224933
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
nsy03000
]
104224933
Transcription factors [BR:
nsy03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
104224933
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GFIT
Motif
Pfam:
HLH
bHLH_SAC51
bHLH_LHW
Motif
Other DBs
NCBI-GeneID:
104224933
NCBI-ProteinID:
XP_009774962
UniProt:
A0A1U7W4K0
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Position
1:complement(129480572..129486471)
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AA seq
719 aa
AA seq
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MPLSEFLKMARGKLESGQQKISSTTHLSSFPENELVELVWENGQIMMQGQSSSAKKNPIP
NKLPSNASKIGKFGVMDPMLNDMPLSVPIGELDLIQEDEGVPWLGYAADDSLQQDYCSQF
LPEISGLTTNEPAGQSEFGLINKRGSSDKMIRDSQSVPIHNAVNFDQRKVSPSSKFSLLC
SLAPQKGHASIPSLGPGVSDIFSSKTSNNSVSVLGDSNQSQVSAGDVKSVKIQKQNMPGS
CSSLLNFSHFSRPATFVKATKLQNITGVLASDSSALEAKGCKEGENVTNSHNHVNAAAVE
DYLSFKKESGLQYPTSAVPSQRESRASGASFHDRSSRVEQSDNVFRESNSDNTPGQFTGA
KATTDTADGEGNAEHGVVCSSVCSGSSAERGSSDQPHNLKRKSRDNEDSGCPSEDVEEES
VGVKKSCPTRGGTGSKRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNKADKASMLDE
AIEYLKTLQLQVQIMSMGAGFCVPPMMFPAGVQHMHAAQMPHFSPMGLGMGMGMGMGYGM
GMLEMNGRSSGCPIFPIPSVQGSHFPSPPIPASAAYPGIAVSNRHAFAHPGQGLPMPIPR
PSLAPLAGQASTGAAVPLNVARVGVSVDRPSVPPILDSKNPVHKKNSQIVNNAECSLPIN
QTYSQVQATNEVLDKSALVQKNDQLLDGTDSAANILTNQTDVPGSEAGEFVRKDTATFS
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atgcctctctctgagtttttgaaaatggctagagggaagcttgaatctggccagcagaaa
atctcatctacaactcatctctcttcttttcctgagaatgaattggttgagcttgtatgg
gaaaatggtcagattatgatgcaaggccagtccagtagtgctaagaagaaccctattcct
aataaacttccatcaaatgcctcaaagattgggaagtttggtgtgatggacccaatgttg
aatgatatgccattatctgtgcccattggtgaactggatttgattcaagaggatgaaggg
gtgccttggttaggttatgcagcagatgatagtcttcaacaagattattgttctcagttt
ttgcctgaaatatctggtttgacgacgaatgaaccagccggacagagtgaatttggttta
ataaataagagaggtagttccgataagatgattagggattcacagagtgttcctatacat
aatgctgtgaattttgatcaaagaaaggtttctccttcttccaaatttagcctgttatgt
tcattggcacctcagaaaggtcatgcgtcaattccatccctaggaccaggagtttcagat
atctttagcagtaaaactagcaataattctgtgtctgttttgggggattcaaatcaaagt
caagtttcagctggtgatgttaaaagcgttaaaatccaaaagcaaaatatgcctggaagt
tgctccagcttgctgaacttctcgcatttctcaagacctgctacatttgttaaagcaact
aagcttcaaaatattactggggtcttagcctcagattcatctgccttagaagcaaaggga
tgtaaagaaggagaaaatgtgacaaatagccacaatcatgttaatgctgcagcagttgaa
gactatttaagtttcaagaaggaaagtggcctccaatatccaactagtgccgtaccttct
caacgcgagtcaagagcatctggggctagctttcatgatagatcatctcgtgtcgaacag
tctgataatgtattcagagagagtaatagtgacaatactcctggtcagtttactggtgca
aaagcaacgacagatacagctgatggtgagggaaatgctgaacatggggttgtttgctca
tctgtatgctctggtagcagtgcagagagaggatcaagtgatcagcctcataatctaaag
aggaaatcccgtgataatgaggattccgggtgtccaagtgaagatgttgaagaagaatct
gttggtgtaaaaaaaagttgccctactcgaggaggtacaggttcaaagagaagccgagct
gcagaggtgcataatttatctgagcggaggcgaagggataggattaacgaaaagatgcgt
gcattacaggaactaatacccaactgcaacaaggcggataaagcttcaatgcttgatgaa
gctattgaatatttgaagacacttcaactgcaagtacagataatgtctatgggagcaggg
ttttgtgtcccgccaatgatgtttcctgctggagtgcagcacatgcatgctgctcaaatg
ccacatttctctccaatgggtttagggatgggtatgggaatggggatgggctatggaatg
ggtatgcttgagatgaatggtagatcctctggctgccctatttttccaatcccctctgtt
caaggatcgcattttccgtcacctccaattcctgcctctgctgcttatccaggaatagct
gtatctaatcgtcatgcctttgcacatcctggtcaaggacttcccatgccaatcccacga
ccatctttggctcctttggcagggcaagcatcaactggtgctgctgtccctttgaacgtt
gcaagggtaggagtttcagtggatagaccgagtgtaccaccgattttggattccaagaat
ccagtacacaagaagaactcacagatagtcaataatgctgaatgtagcctcccaataaat
cagacatacagtcaggtgcaagcaacaaacgaagttctggacaaatcagctttggtgcaa
aaaaatgatcaactcctcgatggtactgatagtgcagctaatatcttgaccaaccaaaca
gatgtgccaggaagtgaagcgggtgagtttgttagaaaagacactgcgacattcagttga
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