Nicotiana sylvestris (wood tobacco): 104228679
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Entry
104228679 CDS
T05026
Name
(RefSeq) lycopene epsilon cyclase, chloroplastic
KO
K06444
lycopene epsilon-cyclase [EC:
5.5.1.18
]
Organism
nsy
Nicotiana sylvestris (wood tobacco)
Pathway
nsy00906
Carotenoid biosynthesis
nsy01100
Metabolic pathways
nsy01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
nsy00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
104228679
Enzymes [BR:
nsy01000
]
5. Isomerases
5.5 Intramolecular lyases
5.5.1 Intramolecular lyases (only sub-subclass identified to date)
5.5.1.18 lycopene epsilon-cyclase
104228679
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Motif
Pfam:
Lycopene_cycl
DAO
Pyr_redox_2
HI0933_like
FAD_binding_2
GIDA
FAD_oxidored
Pyr_redox_3
Motif
Other DBs
NCBI-GeneID:
104228679
NCBI-ProteinID:
XP_009779493
UniProt:
A0A1U7WLQ2
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Position
6:12481117..12485704
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AA seq
524 aa
AA seq
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MECIGARNFATMAVFTCPRFKSLGRKRIMPRKKQPFWPIHMKVKCSGSDSCVVVKEDFAD
EEDYIKAGGSELVFVQMQQNKDMDLQSKLSDKLRQISSAGQTILDLVVIGCGPAGLALAA
ESAKLGLNVGLVGPDLPFTNNYGVWEDEFKDLGLQACIEHVWSDTIVYLDDADPILIGRA
YGRVSRHLLHEELLKRCVEAGVLYLNSKVDRIVESTSGHSLVECEGDIVIPCRFVTVASG
AASGKFLQYELGGPRVSVQTAYGVEVEVDNNPYDPSLMVFMDYRDYVRHDAQSLEAKYPT
FLYAMPMTKTRVFFEETCLASKDAMPFDLLKKKLMLRLNTLGIKIKKIYEEEWSYIPVGG
SLPNTEQKTLAFGAAASMVHPATGYSVVRSLSEAPKCASVLANILRQNHVKNMITSSSAT
SISTQAWNTLWPQERKRQRSFFLFGLALILQLDIEGIRSFFRAFFRVPKWMWQGFLGSSL
SSADLMLFAFYMFIIAPNDMRKGLIRHLLSDPTGATMIRTYLTF
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
atggagtgtattggagctcgaaattttgctacaatggcggtttttacgtgtccgagattc
aaatcattaggaagaaagagaattatgccaagaaaaaagcaaccattttggcctatacat
atgaaagtgaagtgtagtggaagtgatagttgtgtagtggttaaagaagattttgctgat
gaagaagattacataaaagctggtggttcagaacttgtttttgttcaaatgcagcagaat
aaagacatggatctacagtctaagctttctgataagttgcgacaaatatcatcagctgga
caaactatactggatttagtggtcattggctgtggtcctgctggtcttgctcttgctgcg
gagtctgctaaactcgggttgaacgtggggctcgttggtcctgatcttcctttcacaaat
aactatggtgtctgggaagacgagttcaaagatcttgggcttcaagcatgcattgaacat
gtttggagtgataccattgtatatcttgatgatgccgatccaattcttattggacgtgct
tatggaagagttagtcgccatttactgcatgaggagttactcaaaaggtgtgtggaggca
ggtgttttatatcttaactcgaaagtggataggatcgttgagtccacaagtggccacagt
cttgtagagtgcgagggcgacattgtcattccttgcaggtttgtcactgttgcatctgga
gccgcctcagggaaattcttgcagtatgagttgggaggtcctcgggtttctgttcaaaca
gcttatggagtggaagttgaggtcgataacaatccgtatgatccaagcctgatggttttc
atggattatagagactatgtcagacacgacgctcaatctttagaagctaaatatccaaca
tttctttatgccatgcccatgactaaaacaagagtctttttcgaggaaacttgtttggct
tcaaaagatgcaatgccatttgatctattaaagaaaaaactgatgttacgattgaacaca
ttgggcataaaaattaaaaaaatctacgaggaggaatggtcttacataccagttggtgga
tcgttgccaaatacagagcagaaaacacttgcgtttggcgctgctgctagcatggttcat
ccagctacaggttattcagttgtcagatcactgtccgaggcgccaaaatgcgcctccgta
cttgcaaatattttaagacaaaatcatgtcaagaacatgattaccagttcaagtgccaca
agtatctcaactcaagcttggaacaccctttggccacaagaacgaaaaaggcaacgatcg
tttttcctatttggattggcactcatattgcagctggatattgaggggattaggtcattt
ttccgcgcattcttccgtgtaccaaaatggatgtggcaaggttttcttggctctagtctt
tcatcagcagacctcatgttatttgccttctacatgtttattattgcaccaaatgacatg
agaaaaggcctaatcagacatctgttatctgatccaactggtgcaactatgataagaact
tatcttacattttag
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