Nicotiana sylvestris (wood tobacco): 104231492
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Entry
104231492 CDS
T05026
Name
(RefSeq) ATP-dependent helicase rhp16-like isoform X1
KO
K15083
DNA repair protein RAD16
Organism
nsy
Nicotiana sylvestris (wood tobacco)
Brite
KEGG Orthology (KO) [BR:
nsy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nsy03400
]
104231492
DNA repair and recombination proteins [BR:
nsy03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NER4 complex
104231492
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
zf-C3HC4
ResIII
zf-C3HC4_2
zf-RING_UBOX
zf-C3HC4_3
zf-RING_5
zf-RING_2
DEAD
Prok-RING_4
zf-C3HC4_4
zf-RING_10
zf-RING_6
Motif
Other DBs
NCBI-GeneID:
104231492
NCBI-ProteinID:
XP_009782802
UniProt:
A0A1U7WS93
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Position
7:26485287..26491973
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AA seq
754 aa
AA seq
DB search
MDPPIPEDQGNGGYLDPMAEKALLMKRIEGRKKERESNKKKRSPLKWETWEEQMDKWLTK
NYSRDVDLGNTQNVLVPAETAEPPSDFILPLLRYQKEWLAWSLKQEESVARGGILADEMG
MGKTVQAIALVLAQRELQKSNSNSSILSSLPSTSQIFPAVKGTLVVCPVIAGIQWFSEIE
RCTTKGSNRILVYHGTDREKHMHKLAEYDFVITTYSTIEVDYRKYMTPSKELSKNLEPRV
EVLDQKTGSTENLSNSGSIDNSAVSRRKSALHSVKWDRIILDEAHYVKNSRCKTSRAVFA
LESSYKWALTGTPLQNRIGELYSFVRFLQAPYAYYFCKDCDCTELDYSFAECPQCHHNCA
RHFLWWNRYIKKPLQENPNKGAGKDAMLLLKHNILKKLLLRRTKKERAAELALPMKTVTL
RKDSLNDEERDFYMSFHNESKTQFDTYVRVGTLTNNYAHVFAIITRLRQAVDHPYLVVCS
STDLTSVNKDAGDVEKSCSLCKDTVEDPIVTSCTHVFCKTCLINFAESRGKPACPSCDKP
LTFDSNANNDKGDSSSKPTVKGFRSSSISNKIQRDGFQTSTKIEALREEIRFMVERDGSA
KGIVFSQFTSFLDLIQYSLQKSGVNCVQLVGSMSMAERNAAVTTFTEDPKCRILLMSLKA
GGVALNLTVASHVFLMDPWWNPAVEWQAQDRIHRIGQHKPVRIVRFVIEDTIEERILELQ
EKRKLFFEGTVGGSSDALGKLTKSDLDFLFYRHF
NT seq
2265 nt
NT seq
+upstream
nt +downstream
nt
atggatcctccaattccagaagaccaagggaatggtggatatcttgatccgatggcggag
aaggctttattgatgaaaaggatagaaggtagaaaaaaagaacgtgagagtaacaaaaag
aaaagatcacctttgaagtgggagacatgggaagaacaaatggataagtggcttacaaaa
aattattcaagagatgtagacttaggtaatactcagaacgtgttggttccagctgaaaca
gccgagccaccatccgattttatattgccactgctaaggtaccaaaaggagtggttggct
tggtcattaaagcaagaagaatctgtagcaagaggaggtattcttgctgatgaaatggga
atggggaagactgttcaagccatagcacttgtgcttgctcaacgcgaattacagaaatca
aatagtaattccagtatattgtcatctttgccaagtacttcccagatattcccagcagtc
aaaggaactctagttgtatgtcctgtgattgcaggaatccaatggtttagcgagattgaa
cgttgcaccactaaaggaagcaacagaattcttgtttatcatggcaccgacagggagaaa
catatgcacaaattggcggaatatgattttgttattactacctactccaccattgaggtt
gactataggaagtatatgacaccatcaaaggagctgagtaagaacttagaacctcgggta
gaagtgttggaccagaaaacaggttctacagaaaatttgagcaacagtggttctattgat
aattcagctgtgtccaggaggaagtcagctttgcattcagtgaagtgggaccgcatcatt
ttggatgaggcacattatgtgaaaaattcacgctgcaaaacctcaagagctgtttttgcg
ttagaatcttcttataagtgggccttaactggtacacccctgcaaaatcgtataggagaa
ttgtactcatttgttcgtttcctacaagctccttacgcttattacttttgcaaagattgt
gattgcacagaacttgattatagcttcgctgagtgcccacagtgccaccacaactgcgca
cgccactttctctggtggaatagatatattaaaaaacctttacaagaaaatccaaacaaa
ggggctggtaaagatgcgatgcttttattgaagcacaatattctgaaaaagctattgcta
agacgtaccaaaaaggaaagagctgctgagttagcacttcccatgaagactgttactctg
agaaaagattctttgaatgacgaagaacgcgacttctacatgtcatttcacaatgaaagc
aagacacagttcgatacatatgttagggtgggaactctaacgaataactatgctcacgtt
tttgctataatcacacgcctacggcaggcagttgatcacccttaccttgtggtatgctct
agcacagatttgactagtgtgaataaagatgctggagatgttgaaaaatcgtgtagctta
tgtaaagatacggtggaagatccaatagttacttcttgcacacacgtgttttgcaagacg
tgtttgataaactttgctgaaagtaggggaaaaccggcatgcccttcatgtgataaaccc
cttacatttgactccaatgcaaataatgataagggggattctagttctaagcctactgtc
aaagggtttaggtcctcaagtatatcgaacaaaattcagcgcgatggattccagacaagc
actaaaatagaagctttgagggaagaaattaggttcatggttgaaagagacggttctgca
aaaggaatagttttcagccagttcacatcgtttttggatctaatacagtactctcttcag
aaatcgggcgtcaattgtgttcaattagttggatccatgtctatggctgaaagaaatgct
gcagttaccacatttactgaagatccaaaatgcaggatacttcttatgagcttgaaagct
ggaggtgttgccctcaatcttacagttgcatcacatgttttcttgatggatccttggtgg
aatcctgcggtggagtggcaagcacaagatagaatccatcgaatagggcaacataaacca
gtcaggattgtgagattcgtaattgaggatacaattgaagaaaggatcttagagttacaa
gagaagaggaaactattttttgaagggactgtcggtggttcttcagatgccttgggaaag
ctaacaaagtcagacttggatttcctgttttatcgtcacttttaa
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