Nicotiana sylvestris (wood tobacco): 104241015
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Entry
104241015 CDS
T05026
Name
(RefSeq) transcription factor PIF3-like
KO
K12126
phytochrome-interacting factor 3
Organism
nsy
Nicotiana sylvestris (wood tobacco)
Pathway
nsy04075
Plant hormone signal transduction
nsy04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
nsy00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
104241015
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
104241015
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
nsy03000
]
104241015
Transcription factors [BR:
nsy03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
104241015
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GFIT
Motif
Pfam:
HLH
bHLH_SAC51
bHLH_LHW
Motif
Other DBs
NCBI-GeneID:
104241015
NCBI-ProteinID:
XP_009794217
UniProt:
A0A1U7XQ57
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Position
11:complement(78840326..78848061)
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AA seq
650 aa
AA seq
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MPLSEFLKMARGKLESGQEKRSSTTDPSSSLEDELVELVWENGQIVMQSRSSRAKKSPTF
INLPSSSLRVKDKFTGNSSTTKIGKFGVMDSMFDNMPLSVPNDEMELTEEDEMVPWLSYS
ANDSPQQDYHSPLLPEISGLTVNEPSGRRGFASMDKRGISNQMNGASHSVPIHNIVNSEQ
GNASKLSPSTFNLLCSGAPKKSSAPILPLGSRISDIISSNTSCNMPVSTFGYSNSSQASA
GVIKSMKMQKQNIPGNSSSLLNFAHFSRPITGGSAVSGSSTIGARGNIERENGGSSRNRV
SEVPFESYFSSEKENDVHSPPYMASSKVESKGSVGLHERACPIEQSDNLCGDSPSNNDMS
RDQFTGANAIKEFPDGERNVEPVVVCSSVCSGSSAERASSDHPRTLKRKTRDNEESEFQS
EDVEEESVGIKSAYPARGGAGSKRSRAAEVHNLSERRRRDRINEKMSALQDLIPNCNKVD
KASMLDEAIEYLKTLQVQVQMMSMGAGLCAPPMMFPAGIQYMHAANVPQFSPMGLGMGMG
FGMGKLEMNGGSPGCSIYPIPTMQGAHLHSPPVSGSATFPGVAGCNLHSFRHPGQGLPVS
VPPASLVPLAGQPSTNAAVGLNITTAGVHTDVRNTSTLDPETKDALRTHI
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
atgcctctctctgagttcttgaaaatggctagagggaagcttgaatctggccaggagaaa
aggtcatccacaactgatccgtcctctagtcttgaggatgaattggtagagctagtatgg
gaaaatggtcaaattgtgatgcaaagtcggtccagcagagctaagaagagccctactttt
attaatcttccatcaagctctctgagagttaaagacaagttcactgggaattcctcaacc
acaaagatcggaaaatttggtgtaatggactctatgtttgataatatgccattatctgtg
cccaatgatgaaatggagttgactgaagaggatgaaatggtgccttggttgagttattct
gcaaatgatagcccacaacaagattatcattctccactgttaccagaaatatctggtctg
acggtcaatgaaccatctggtaggagaggatttgcatcaatggataagagaggtatttct
aatcagatgaatggggcttcacatagtgttcccattcataacattgtgaactcagaacaa
ggaaatgcatcaaagctctctccttctacatttaacctgttatgttcaggggcaccaaag
aaatcttcggcaccaattctgcccctaggatcacgaatctcagatattattagcagtaat
actagctgcaatatgccagtttccacttttggatattcaaattcaagtcaagcttcagct
ggtgttatcaaaagcatgaagatgcaaaagcaaaacatacctggaaatagctccagtttg
ttgaacttcgcgcatttctcaagacctattactgggggttcagctgtttcaggctcgtct
accataggggcaaggggaaatatagagagagagaatgggggaagtagcagaaatcgtgtt
agtgaggtaccatttgaatcatacttcagttcagaaaaggaaaatgatgtccattctcca
ccttatatggcatcttccaaagtcgagtcaaaaggatctgtcggccttcacgagagggca
tgtcccattgaacagtctgataatttatgcggagatagtccaagtaataatgacatgtct
cgtgatcaatttactggtgcaaatgcaatcaaagaatttcctgatggtgagagaaatgtt
gaacctgtagttgtgtgttcatctgtatgctctggcagtagcgcagagagagcatcaagt
gatcatcctcgtactttgaaaaggaaaactcgtgacaacgaggagtctgaattccaaagt
gaagatgttgaagaagaatctgttggtatcaaaagcgcttatcctgctcgaggaggtgca
ggttcaaagagaagcagagctgcagaagtgcataatctatctgagcggaggcgaagggat
aggattaatgagaagatgagtgcattacaggatctcataccaaactgcaataaggtggat
aaagcctcaatgctcgatgaagctattgaatacttgaagacacttcaagttcaagtacag
atgatgtctatgggagctgggttgtgtgcgccaccaatgatgtttcctgcaggaattcaa
tacatgcatgccgccaatgtgccacaattttctccgatgggtttagggatgggaatgggt
tttgggatgggtaaacttgagatgaatggtggatcccctggctgctctatttatccaata
cccactatgcaaggagcacatcttcactccccaccagtttctggctccgctacttttcca
ggagtagctggatgtaaccttcactcttttaggcatcctggtcaaggacttccagtgtcg
gtaccacctgcatctttggttcctttggcagggcaaccatcgacaaatgcagctgtgggt
ttaaatatcacaactgcaggagttcatacagacgtacggaatacttcaactttagacccc
gaaaccaaggacgcactaagaactcacatataa
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