Nicotiana tabacum (common tobacco): 107759085
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Entry
107759085 CDS
T04643
Name
(RefSeq) WD-40 repeat-containing protein MSI4-like
KO
K10752
histone-binding protein RBBP4
Organism
nta
Nicotiana tabacum (common tobacco)
Pathway
nta03082
ATP-dependent chromatin remodeling
nta03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
nta00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
107759085
03083 Polycomb repressive complex
107759085
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
nta03036
]
107759085
Chromosome and associated proteins [BR:
nta03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
107759085
Histone modification proteins
HAT complexes
HATB complex
107759085
HDAC complexes
Sin3A-HDAC complex
107759085
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
107759085
PRC2.2
107759085
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
107759085
Heterochromatin formation proteins
Other heterochromatin formation proteins
107759085
Chromatin remodeling factors
NuRD complex
107759085
NuRF complex
107759085
NuRF complex (fruit fly)
107759085
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
Beta-prop_EIPR1
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
Beta-prop_RIG_2nd
Beta-prop_EML
WDR55
EIF3I
Beta-prop_WDR90_POC16_2nd
CAF1C_H4-bd
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
Beta-prop_DCAF12
WD40_RFWD3
Beta-prop_IFT122_1st
Beta-prop_SPT8
eIF2A
Beta-prop_IFT140_1st
Beta-prop_WDR35_TULP_N
WDR90_beta-prop_4th
Beta-prop_WDR19_1st
Motif
Other DBs
NCBI-GeneID:
107759085
NCBI-ProteinID:
XP_016432445
UniProt:
A0A1S3WXN6
LinkDB
All DBs
Position
Un
AA seq
420 aa
AA seq
DB search
LLFLSFSWGPQFEQATYKNRQRLYLSEQTDGSVPNTLVIANCEVVKPRVAAAQHISQFNE
EARSPFVKKYKTIIHPGEVNRIRELPQDSKIVATHTDSPDVLIWDVESQPNRHATLGVNN
SRPDLILTGHQDNAEFALAMCPSEPFVLSGGKDKSVVLWSIHDHVSTLAADQGATKSPGS
GASNSKPSAEGPTVQARGVFQGHDDTVEDVQFCPSSAQEFCSVGDDSCLILWDARTGSSP
AVKVEKAHNADLHCVDWNPHDVNYILTGSADNTVRMFDRRNLTSGGVGSPIHIFEGHTAA
VLCVQWSPDKSSVFGSSAEDGILNIWDYDKIGKMEDSAGRKASTSPPGLFFRHAGHRDKV
VDFHWNAADPWTIVSVSDDGESTGGGGTLQIWRMIDLIYRPEDEVLNELEKFKSHLLTCS
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
ttactgtttctctctttcagttggggtccccagtttgagcaagcaacttacaagaaccgc
cagcgcctctacctttctgagcaaactgatggcagcgttccaaatacgcttgtcatagct
aattgtgaagttgtcaaacctagggttgcagcagcgcaacacatatctcagttcaacgaa
gaagcacgttcgccttttgtaaagaagtacaaaactattattcatccgggtgaggtgaat
cgaataagggaactgcctcaggatagcaagattgtggccacacacactgacagtcctgat
gttcttatttgggatgttgagtctcagcctaaccgtcatgctaccttgggcgtaaataat
tctcgaccggacttgatattgactggacatcaagacaatgctgaatttgcgctcgctatg
tgcccttctgagccttttgtgctctctggagggaaggacaaatcggttgttctgtggagc
attcacgaccatgtgtcaacattagcagcagaccagggagctacaaagtctcctggatct
ggagcaagtaactcgaaaccttctgcagaaggccctactgttcaagctcgaggtgttttc
caaggacatgatgataccgtagaagatgttcagttttgcccttccagtgcacaggagttt
tgcagtgttggagatgattcctgcctaatactgtgggatgccagaactggttcttctcct
gctgtcaaggtagaaaaggctcataacgctgatcttcattgtgttgattggaatcctcac
gatgtaaattatattttgactgggtcggcagacaacactgttcgcatgtttgatcgacga
aacctcacttctgggggagtgggatcgcctatacatatctttgagggccatactgctgct
gtgctttgtgtacagtggtccccagataaatcatcagtctttggaagttctgcagaagat
ggtatccttaacatctgggattatgacaagattggtaagatggaggactctgctggtaga
aaagcttcaacatctcctcctggcttattctttcgtcacgctggacatagggataaggtg
gttgacttccattggaatgcagcagatccatggaccattgttagtgtttcagatgatggt
gaaagtactggcggaggcggtacattacagatatggcgaatgattgatctcatttacaga
cccgaagatgaggttctgaatgaactagagaagttcaagtctcacctgctcacttgttct
tag
DBGET
integrated database retrieval system
