| Entry | T04643 |
| Org code | nta |
| Name | Nicotiana tabacum (common tobacco) |
| Category | Reference genome |
| Annotation | yes |
| Taxonomy | TAX:4097 |
| Lineage | Eukaryota; Viridiplantae; Streptophyta; Magnoliopsida; Solanales; Solanaceae; Nicotiana; Nicotiana tabacum |
| Org group | Plants; Eudicots; Solanales |
| Brite | KEGG organisms [BR:br08601]
KEGG organisms in the NCBI taxonomy [BR:br08610]
KEGG organisms in taxonomic ranks [BR:br08611]
KEGG organisms: plants [BR:br08613] |
| Data source | RefSeq (Assembly: GCF_000715075.1 Chromosome) |
| Keywords | Photosynthesis |
| Chromosome | 1 (RS: NC_134080)
2 (RS: NC_134081)
3 (RS: NC_134082)
4 (RS: NC_134083)
5 (RS: NC_134084)
6 (RS: NC_134085)
7 (RS: NC_134086)
8 (RS: NC_134087)
9 (RS: NC_134088)
10 (RS: NC_134089)
11 (RS: NC_134090)
12 (RS: NC_134091)
13 (RS: NC_134092)
14 (RS: NC_134093)
15 (RS: NC_134094)
16 (RS: NC_134095)
17 (RS: NC_134096)
18 (RS: NC_134097)
19 (RS: NC_134098)
20 (RS: NC_134099)
21 (RS: NC_134100)
22 (RS: NC_134101)
23 (RS: NC_134102)
24 (RS: NC_134103)
MT; Circular (RS: NC_006581)
Pltd; Circular (RS: NC_001879) |
| Statistics | Number of protein genes: 60381
Number of RNA genes: 5535 |
| Created | 2017 |
| Reference | PMID: 38278835 |
| Authors | Sierro N, Auberson M, Dulize R, Ivanov NV |
| Title | Chromosome-level genome assemblies of Nicotiana tabacum, Nicotiana sylvestris, and Nicotiana tomentosiformis. |
| Journal | Sci Data 11:135 (2024)
DOI: 10.1038/s41597-024-02965-2 |
| Reference | PMID: 24807620 |
| Authors | Sierro N, Battey JN, Ouadi S, Bakaher N, Bovet L, Willig A, Goepfert S, Peitsch MC, Ivanov NV |
| Title | The tobacco genome sequence and its comparison with those of tomato and potato. |
| Journal | Nat Commun 5:3833 (2014)
DOI: 10.1038/ncomms4833 |
| Reference | PMID: 16453699 |
| Authors | Shinozaki K, Ohme M, Tanaka M, Wakasugi T, Hayashida N, Matsubayashi T, Zaita N, Chunwongse J, Obokata J, Yamaguchi-Shinozaki K, et al. |
| Title | The complete nucleotide sequence of the tobacco chloroplast genome: its gene organization and expression. |
| Journal | EMBO J 5:2043-2049 (1986)
DOI: 10.1002/j.1460-2075.1986.tb04464.x |
| Reference | PMID: 15583938 |
| Authors | Sugiyama Y, Watase Y, Nagase M, Makita N, Yagura S, Hirai A, Sugiura M |
| Title | The complete nucleotide sequence and multipartite organization of the tobacco mitochondrial genome: comparative analysis of mitochondrial genomes in higher plants. |
| Journal | Mol Genet Genomics 272:603-15 (2005)
DOI: 10.1007/s00438-004-1075-8 |
