Nicotiana tabacum (common tobacco): 107759257
Help
Entry
107759257 CDS
T04643
Name
(RefSeq) autophagy-related protein 11-like
KO
K08330
autophagy-related protein 11
Organism
nta
Nicotiana tabacum (common tobacco)
Pathway
nta04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
nta00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
107759257
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nta04131
]
107759257
03029 Mitochondrial biogenesis [BR:
nta03029
]
107759257
Membrane trafficking [BR:
nta04131
]
Autophagy
Cytoplasm to vacuolar targeting (CVT) pathway
Scaffold protein
107759257
Mitophagy
Scaffold proteins
107759257
Mitochondrial biogenesis [BR:
nta03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
107759257
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ATG17_like
ATG11
PspA_IM30
IKKbetaNEMObind
CCDC89
Motif
Other DBs
NCBI-GeneID:
107759257
NCBI-ProteinID:
XP_016432627
UniProt:
A0A1S3WYC5
LinkDB
All DBs
Position
18:4823009..4833577
Genome browser
AA seq
1150 aa
AA seq
DB search
MSSSNASSGVVQVGKLLVHIAENGQSYELNCDEYTLVDAVQQFLESVSGIPIGDQLLLCL
DVKLELHCPLSTYKLPSDDREVILFNKSRMRSNAPPPLLEEVEIIDIPDPSLPSSSHDPH
PLDDATDPALKALPSYERQFRFHFQHGHAIYSRSQMRIETCERLLREQKVQERALGIARG
NLDHFYGMIVQNYNDFLKCYSQQYRSHSNLLSNFGRDIEKLRSCKLHPALQTANRKCLLD
FVKEENLRKLAEDCSGSHRQFENKVTEFKHEFGELEHNAKHLFSTKGSHIIREVELAIRD
HQKYVSEQKSIMQALSKDVNMVKKLVDDCLANQLSSSLRPHDAVSALGPMYECHEKSYLP
KMQACDGEISNLVDFCKDKKNEMNILVHSYMQKVAYIQYTIKDIRCKFAVFQEALRRQGD
LFEHLKVVRGIGPAYRACLAEVVRRKAAMKLYMGMAGQLAERLATRREAEVRRREEFLRV
NSTYIPRDILASMGLYDTPNHCDVNITPFDAKLLDVDISDIDRYAPEYLLGLSSRSEKHG
TLKSPLSMSNDGSQLAETEVSDFAEKIDSEELLQGSEVLDIAGTSKMEVENAKLRAELAS
KIAFICSTCPELYYESLDDSKIDSVLKEAREKTSEALNLKEEYEKHLHSMLKTKQIQCES
YEKRIQELEQRLSDHYSQGHAHSADEGVSYLTVSAVKNDDSKSDMPHMPAEVMDEVSCAS
SSSNIKPGSKNIKEQEGLDDNMTDSSGMVNPQLDSSMLDPHREEEHESLPVKDKKDTGLV
AGGDIALATSSMAVSISQPQAEMPSEVTGEQGFDAKERADLLLELQGVGAEKSKLLDESE
AKVKSLTEEVAKLVRELEIRGKLLDESQMNCAHLENCLHEAREEAQTHLCAADRRASEYS
ALRASAVKMRSLFERLRACVLSGGVAGLPESLRALSQSLANSINEKEEDGSAEFRECIRV
LADKVGALSRHRADLADKCTKFDAANKQLAKELDEKKELVNTLYKKHQHEKQANKEKISF
GRLEVHEIAAFVLNSTGNYEAINRNSPRYYLSAESVALFTDHLPNRPSYIVGLVVHIERQ
TVRLPPSTSVRVDHDRDRLDILTSDTGTTNRLSLNSGSTTNPYGLPVGCEYFVVTVAMLP
DTAIHSSPTS
NT seq
3453 nt
NT seq
+upstream
nt +downstream
nt
atgagttcatcaaatgcttcatcaggtgtagtccaagtaggcaagcttttggttcatatt
gctgagaatgggcaatcatatgaactgaattgtgatgaatatacacttgttgatgctgtt
cagcaatttcttgaatctgtttctggtattccgattggtgatcagcttcttttatgtttg
gatgtgaaacttgaattgcattgtccccttagtacttataagctcccatcggatgaccgg
gaagttatcttgtttaataaatctagaatgaggagcaatgcgccacctccattactcgag
gaagttgagataattgatattcctgacccgtcattgccatcgtcgtctcacgaccctcac
cctttggatgatgcgactgaccctgccttaaaagctttgccttcttacgagaggcaattt
aggttccacttccagcacggtcatgccatttatagccgttcccaaatgaggatcgagact
tgtgagaggcttttaagagagcagaaagtgcaagaacgggcgttaggcattgctagggga
aatcttgatcacttctatgggatgatagtgcaaaattacaatgactttttaaagtgttat
tcccagcaatatcgtagccattctaatttgctatctaattttggaagggatatagagaag
ttgaggtcttgcaaacttcatcctgctttgcagactgctaaccgcaagtgcttgctggat
ttcgtgaaagaagagaacttgcggaagttggcagaggattgtagtggttcacataggcag
tttgagaataaagtcaccgaatttaagcacgagtttggagagctagagcacaatgctaag
catttattttctaccaaaggttcacatattattagggaagtggaacttgctatcagagac
catcagaaatatgtcagtgagcagaaaagcataatgcaggctttgagcaaggatgtgaat
atggtcaaaaagctcgtggatgactgtttggccaaccagttatcatcttcactacgtccg
catgatgctgtttcagccttgggaccaatgtatgaatgccatgagaaaagttatcttccc
aagatgcaggcttgtgatggtgaaatctctaatttggttgacttctgcaaggataaaaag
aatgaaatgaacattcttgtgcatagttacatgcaaaaggtagcatatatccagtacacc
atcaaagatatacgatgcaaatttgctgttttccaggaagctttgaggcgtcaaggcgat
ttattcgagcacttaaaagtggtccgaggcattggtcctgcttacagggcatgccttgct
gaagtggtacgaaggaaagcggcaatgaaactatacatgggaatggctggacaattagct
gaacggcttgcaaccaggagggaggcagaagttcgtagaagagaggagtttctgagagtt
aatagtacatacattcctcgggatattttggcttccatgggactgtacgatacccctaac
cactgtgatgtcaatataactccttttgacgcgaaattgcttgacgttgatatctcagac
attgatcgctatgctcctgagtatctgttgggactctcttccaggagcgaaaaacacggg
acattaaagagtccgctttccatgtctaacgatggttctcaattagctgaaactgaggta
agtgactttgctgagaaaattgattccgaggaattacttcagggttcagaggttctggat
attgctggaactagcaaaatggaagtggagaatgcaaaattgagggctgaacttgcttct
aagatagcctttatttgttctacctgtcctgaattatattatgaatcacttgatgacagt
aaaattgatagcgtactaaaagaagcaagagagaaaacctctgaggctctaaatctgaaa
gaagagtacgagaagcaccttcattctatgcttaagacgaagcaaattcagtgtgaatct
tatgaaaaacggattcaggagttggaacagaggttgtctgatcattactcgcaagggcat
gcacattctgctgatgagggtgtgtcttacttaactgtttcagctgtgaagaatgatgac
agcaaatctgacatgcctcatatgcccgctgaagtcatggatgaggtttcttgtgcttct
agttcatcgaatatcaagcctggctctaaaaatataaaggaacaagaaggcttagatgac
aatatgactgattcctctggtatggtaaaccctcagttggattcatctatgctagatcca
catcgtgaagaagagcatgagagcctccccgtgaaagataagaaagataccggattagtg
gctggtggagatatcgcacttgcgacaagttccatggctgtgagtatatctcagcctcag
gccgaaatgccttctgaagtaactggtgaacaaggtttcgatgctaaagaaagagcggat
cttctcctggagttgcaaggtgtcggggctgaaaaatcaaagctactggatgaaagcgaa
gccaaggtgaaatccttaacagaggaggtagccaagctggtgagagagctggagatcaga
gggaagcttcttgatgaatctcagatgaattgtgctcatctagagaattgtcttcatgaa
gcgagagaggaagctcaaacccatctatgtgcagctgatagaagggcttctgagtatagt
gctttgcgtgcttctgcagttaaaatgcgcagcctctttgaaagattaagagcgtgtgtg
ttgtccggtggtgtagctggtttgcctgagtccttgcgtgcattatctcaatctttagcc
aattcaatcaatgaaaaagaagaagatggctcagctgaatttcgtgaatgcattcgggta
cttgctgataaagttggtgcattatcaaggcaccgagcggacctggctgacaaatgtacc
aaatttgatgctgcaaataaacagctagcgaaggagttggacgaaaagaaagaattggtt
aacaccctctataaaaagcatcaacacgagaagcaggcaaacaaagagaagatatcgttt
gggcgtttagaagtccatgagattgcagcatttgtcctcaactctactggaaattatgag
gctatcaatcgaaacagtcctcgttactacctctctgcagaatctgtggctttgtttact
gaccatcttccaaatcgtccaagctatatcgtagggctggttgtgcatattgaacgacag
actgtgaggctgccaccctcaacatcagttcgagttgaccatgatagagaccgtttagat
atactgacttctgacacaggaacgaccaatcgtttgtccttgaattcaggatcaactacg
aacccgtatggtctccctgtcggctgtgaatacttcgtagtgacagtagccatgttacct
gataccgccattcattcatcacctacttcctga
DBGET
integrated database retrieval system
