Nicotiana tabacum (common tobacco): 107759580
Help
Entry
107759580 CDS
T04643
Name
(RefSeq) probable pectate lyase 4
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
nta
Nicotiana tabacum (common tobacco)
Pathway
nta00040
Pentose and glucuronate interconversions
nta01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
nta00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
107759580
Enzymes [BR:
nta01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
107759580
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
107759580
NCBI-ProteinID:
XP_016433039
UniProt:
A0A1S3WZH5
LinkDB
All DBs
Position
Un
AA seq
363 aa
AA seq
DB search
MGNHHPRYKHHHHHQQGPPFPVPPVPTAQSQNTVSTQMDLVLPYGQVDSSLRALAGQAEG
FGGSSIGGRDGHIYQVINLNDDGPGSLRDGCRKKEPLWIVFEVSGTIELRSYLSVSSYKT
IDGRGQRIKITGKGLRLKECEHVIICNIEFEGGRGPDVDAIQIKPKSRHIWIDRCSLSDY
DDGLIDITRESTDITVSRCHFSKHDKTMLIGADPSNCTDRCMRVTIHHCFFDGTRQRHPR
VRFGKVHLYNNYTRNWGIYAVCASVESQIYSQCNIYEAGQKKVAFKYLTEKAADKEEGCT
GSIKSEDDLFVSGTQAGLLSTCSKSNIFNPSDFYRHWTVEHPSDALKHYLQHCTGWQSIP
RPN
NT seq
1092 nt
NT seq
+upstream
nt +downstream
nt
atggggaaccaccatccccgttacaaacaccaccatcaccatcaacaaggccccccattt
cctgtgcctccagtacccacagctcaatcccagaacacagtgagtactcaaatggatttg
gttttgccttatggtcaagttgactctagcttgcgtgctctagctggtcaagctgagggc
tttggcggttcttccattggtggtcgtgatggtcatatttatcaagttattaatctcaat
gatgatgggccaggatcacttcgagatggatgtcgtaaaaaagaacctctatggatcgtc
tttgaagtttcagggacgattgaactccgatcttatttgagtgtgtcgtcttacaaaact
attgatgggcgaggccaaagaatcaaaatcacagggaaaggtttgaggttgaaagaatgt
gaacatgtgatcatctgcaatatagagtttgagggaggcagaggacccgatgttgacgcc
attcagattaaaccaaagtcgaggcatatttggatagatcgttgtagccttagtgactat
gacgatggtttaattgacatcacaagggagagcacagatattactgtttctaggtgtcac
ttttcaaagcatgataagaccatgcttattggagcagatccttctaattgtaccgacaga
tgtatgcgggtcaccattcaccactgcttttttgatggaactagacagcggcatcctcgt
gttagatttggcaaagtacatttgtacaacaactacaccaggaactggggaatttatgct
gtttgcgcaagtgtagaatcacagatatattcccagtgcaacatatatgaagctggacaa
aaaaaggtggcctttaaatatctcacagagaaggcagctgacaaagaggaaggatgcact
ggtagcattaaatctgaagatgacttgtttgtctctggaactcaggctggtttgttgtct
acttgcagcaaaagtaacatcttcaatccatccgacttctaccgacactggactgtagaa
catccgagtgatgctctcaaacactaccttcaacactgtacaggatggcagagtatcccg
cggccaaattga
DBGET
integrated database retrieval system