KEGG   Nicotiana tabacum (common tobacco): 107759617
Entry
107759617         CDS       T04643                                 
Name
(RefSeq) THO complex subunit 7A-like
  KO
K13176  THO complex subunit 7
Organism
nta  Nicotiana tabacum (common tobacco)
Pathway
nta03013  Nucleocytoplasmic transport
nta03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:nta00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    107759617
  09122 Translation
   03013 Nucleocytoplasmic transport
    107759617
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:nta03019]
    107759617
   03041 Spliceosome [BR:nta03041]
    107759617
Messenger RNA biogenesis [BR:nta03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     107759617
Spliceosome [BR:nta03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    107759617
SSDB
Motif
Pfam: THOC7 SAB SPATA1_C MG280 DUF6231
Other DBs
NCBI-GeneID: 107759617
NCBI-ProteinID: XP_016433080
UniProt: A0A1S3WZD5
LinkDB
Position
9:complement(93629596..93632287)
AA seq 242 aa
MSIKGRKIAGKGETMASHYAFGQLEDEIIIKHRLLTRTTTTRGEPPLKKLQKKFTTFASE
IEKEADNYGDCKRLAKAFLQELNAFEIPLLKSKTVIDANVREKENFNDLKGEINVQILQA
QADIEDLKRQLEESKVERKHKEEGEVIRKLIAMQPPRSETQKVLTELEKDLAALEAENTA
SSRTLDLRKKQFALLLHVVDELQNTIEEEQRSLVEEMRNVVDDHNKSGIEDVTVGPEAMI
VD
NT seq 729 nt   +upstreamnt  +downstreamnt
atgtcgataaaaggtagaaagattgctgggaagggggagacaatggcatcacattatgca
tttggacaacttgaagacgagataattattaagcatagacttctgactcggacaaccacc
actagaggtgaaccgccactgaagaaactccaaaagaagtttactacttttgcctcggag
atagagaaggaagctgataactacggagattgtaaaagacttgctaaagcattcttgcaa
gagcttaatgcgtttgagattccgctcctaaagagcaaaacagtaatagatgcaaatgtt
agagaaaaggagaatttcaacgacctgaaaggtgaaatcaacgtgcagattttacaagct
caggcggatatagaagatctcaagaggcaacttgaagaaagcaaggttgaaaggaagcat
aaagaagagggtgaggtgatcaggaagttgattgctatgcaacctccaagatccgaaact
cagaaggttttaacagagcttgagaaagatttagctgcgttggaagcagagaatactgct
agttcaaggacattggaccttcgaaaaaagcagtttgcccttttattgcatgtggtcgat
gagttgcagaacacaatagaggaagagcagaggagtttagtcgaagagatgaggaacgta
gtcgatgatcataacaagagtggaatcgaggatgttactgtgggtcctgaggcaatgatt
gtggattag

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