Nicotiana tabacum (common tobacco): 107760390
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Entry
107760390 CDS
T04643
Name
(RefSeq) ubiquitin C-terminal hydrolase 12
KO
K11838
ubiquitin carboxyl-terminal hydrolase 7 [EC:
3.4.19.12
]
Organism
nta
Nicotiana tabacum (common tobacco)
Pathway
nta03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
nta00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
107760390
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
nta01002
]
107760390
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
nta04121
]
107760390
Enzymes [BR:
nta01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
107760390
Peptidases and inhibitors [BR:
nta01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
107760390
Ubiquitin system [BR:
nta04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
107760390
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
USP7_C2
USP7_ICP0_bdg
UCH
UCH_1
Nitroreductase
Malt_amylase_C
Motif
Other DBs
NCBI-GeneID:
107760390
NCBI-ProteinID:
XP_075101129
LinkDB
All DBs
Position
22:complement(195913442..195947416)
Genome browser
AA seq
1123 aa
AA seq
DB search
MTMLNSQPLDHQEEEEMLVPRADMVEGPQPLVEGPQPMEVTPTENASAVENQAVDEPQAS
RFTWTIDNFSRLSVKKLYSEVFSVGSYKWRVLIFPKGNNVDCLSMYLDVADSATLPYGWS
RYAQFSLAVVNQVNPKYTVKKETQHQFNQRESDWGFTSFMLLSELYDTNKGYLVNDRVVI
EADVAVRKVIDYWTYDSKKETGYVGLKNQGATCYMNSLLQTQYHIPYFRKAVYHMPTTEN
DMPSGSIPLALQSLFYKLQYSDTSVATKELTKSFGWDTYDSFMQHDVQELNRVLCEKLED
KMKGTVVEGTIQKLFEGHHMNYIECINVDFKSTRKESFYDLQLDVKGCRDVYASFDKYVE
VERLEGDNKYHAEEHGLQDAKKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKINDRYEFPL
ELDLDRENGKYLSPDADRSVRNLYTLHSVLVHSGGVHGGHYYAFIRPTLSDQWYKFDDER
VTKEDMKRALEEQYGGEEELPQTNPGFNNAPFKFTKYSNAYMLVYIRESDKDKIICDVDE
KDIAEHLRIRLKKEQEEKEDKRRYKAQAHLYTIIKVARDEDLKEQIGREIYFDLVDHDKV
HSFRIQKQMPFNLFKEEVAKELGIPVPFQRFWIWGKRQNHTYRPNRPLSSQEELQTVGQL
REVSNKTNTAELKLFLEVNHGLDLLPIPLLEKSKDDILLFFKLYDPAKEELRYIGRLFVK
SSSKPTDILGKLNELAGFAPNQEIELFEEIKFEPSVMCERLDKKASFRFSQIEDGDIICF
QKKPSPEVEEQVRYPDVSSFLEYVKNRQIVHFRALEKPKEVDFCLELAKSNTYDEVVDKV
AQRLGVDDPSKIRLTPHNCYSQQPKPNPIKYRSVDHLVDMLIHYNQISDILYYEVLDIPL
PELQCLKTLKVAFHHSTKDEIEILNIRLPKQSTVGDVLNEIKSKVDLSRQDAELRLLEVF
YHKIYKIFPLTEKIENINDQYWTLRAEEIPEEEKNLGPHDRLIHVYHFTKETPQNQMQVQ
NFGEPFFLVIHEGETLAEIKVRIQKKLQVPDEEFSKWKFAFLSLGRPDYLQDSDIVSSRF
QRRDVYGAWEQYLGLEHADNTPKRAYSVSQNRHTFEKPVKIYN
NT seq
3372 nt
NT seq
+upstream
nt +downstream
nt
atgaccatgctgaattctcaaccgttggatcatcaagaagaggaggagatgctggtgccg
cgtgcagacatggttgaaggtcctcaacccttagttgaaggtcctcagcccatggaagtg
acgccgactgagaatgctagtgcagtggagaatcaagctgtggatgagccgcaggcttcg
cggtttacttggacaattgataatttctctcggctatcagtgaagaagttatattctgag
gttttcagtgttggtagttataaatggagagtgctaatatttccgaaaggaaataatgtg
gattgtttgtcgatgtacttagatgtagcagattcagctacacttccatatgggtggagt
aggtatgcccagttcagcttagctgttgtgaatcaagtaaatcccaagtatactgtgaaa
aaagagacacaacaccagtttaaccaaagagagagtgactggggcttcacatctttcatg
cttctaagtgagctttatgataccaacaagggatatctcgtaaatgatagagttgttatt
gaagctgatgttgctgtacgtaaggtcattgattactggacatatgactcgaagaaggag
actggatatgttgggcttaaaaatcagggagctacttgttacatgaactctctcctacaa
acccaataccatattccctactttagaaaggctgtgtaccatatgccgactacagagaat
gatatgccttcagggagcattccattagctttgcagagtttattctataagctccagtac
agtgatacgagtgtggcgacaaaagaattaacaaaatcctttggctgggacacttatgat
tcatttatgcagcatgatgtgcaagaactaaatagagttttgtgtgaaaagcttgaagac
aagatgaagggcacggttgtggaagggacaattcagaagttatttgagggccaccacatg
aattacatcgaatgtattaatgtggactttaaatcgacgagaaaagagtcattttatgat
cttcaacttgatgtcaaaggttgtcgcgatgtttatgcctcttttgacaagtatgtagaa
gttgaacgtctagaaggcgataacaagtaccatgctgaagaacatggtttgcaggatgct
aagaagggtgtactgtttattgactttcctccagttctccagcttcagttaaagcggttt
gaatatgatttcatgcgagatacaatggttaagataaatgaccgctacgaatttcctctg
gaacttgaccttgatagggagaatggcaaatatttatctcccgatgcagacaggagtgtc
cgaaacctctatacacttcatagtgttttggttcatagtggtggggtgcatggtggacat
tattatgctttcatcaggccaacgttatcagaccaatggtacaagtttgatgatgaacgg
gtgacaaaagaagacatgaagagggctttagaggaacagtatggtggtgaggaggagttg
ccacagacaaatccaggtttcaataacgctccctttaagtttacaaaatactcaaatgct
tacatgctggtttacatacgtgagagcgacaaggataaaataatatgtgatgtggatgag
aaggacattgcagaacatctgagaataaggttaaagaaagaacaagaagagaaagaggac
aagagaagatacaaagcgcaggcccacctttatacaattatcaaggttgcacgcgatgaa
gatcttaaggaacagattggaagggagatatattttgatcttgtggatcatgacaaagtt
catagctttcggattcagaaacagatgccttttaaccttttcaaggaggaagttgcaaag
gaattgggtatacctgttccatttcagcgtttctggatttggggaaagcggcaaaatcac
acttatcggcctaatcgtccattgagttcacaggaggaactacaaacagttgggcagtta
agagaagtttctaacaaaaccaacactgcggaactgaagttatttttggaagtgaaccat
gggctggatctgcttcctattcctctacttgaaaaaagtaaagatgatatactccttttc
ttcaaactttatgatcctgcgaaagaagaactacgttatattggtaggctgtttgtgaag
agttccagtaagccaactgatatacttggaaagctgaatgaattggctggatttgctccc
aaccaagaaattgagctttttgaggaaataaaatttgaaccttctgtcatgtgtgaacgc
ctagacaagaaggcttcatttcgatttagccagattgaagatggagacattatttgcttt
cagaagaaaccttctcctgaagttgaagaacaagtccgatacccggatgtttcttcattt
ttggaatatgtgaaaaatcgccagattgtccatttcagagctctggagaaaccaaaggaa
gttgatttctgtctggagttagcaaaaagcaacacatatgatgaagtagtggacaaagta
gctcagcgtcttggtgtggatgatccttcaaaaattaggctgactcctcataactgctac
tcacagcaaccaaagcccaaccccattaagtatcggtctgtcgatcatctggttgacatg
cttatccactacaatcagatctctgatattctgtattatgaagttctggacatccctctg
ccagagttgcaatgtctgaagacactcaaggtcgcctttcatcattccacaaaggatgag
attgaaattctgaacataagattgcctaagcagagtactgtgggtgatgtgcttaatgaa
atcaaatcaaaggttgacttgtctcgtcaagatgcagaacttagattacttgaagtcttc
tatcacaagatctataagatctttccactcactgagaaaattgagaatataaatgaccag
tactggacattgcgggcagaggagataccagaagaagagaaaaatcttggtccccatgat
cgtttaattcatgtttaccatttcacgaaagagactccacagaatcaaatgcaagtgcag
aatttcggggaacctttctttctggttatccatgaaggtgaaactttagctgagattaaa
gtgcgcattcaaaagaaattgcaggttccagatgaggagttctctaagtggaagtttgca
tttttgtcattgggccgcccagattaccttcaggactctgacattgtatccagtcgtttc
cagagaagagatgtttatggtgcttgggaacagtatcttgggttggagcatgcagataat
acacctaagagagcttactcagttagccagaatcgacacacctttgaaaagcctgtcaag
atatacaactga
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integrated database retrieval system
