Nicotiana tabacum (common tobacco): 107760475
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Entry
107760475 CDS
T04643
Name
(RefSeq) uncharacterized LOC107760475
KO
K14315
nucleoporin NDC1
Organism
nta
Nicotiana tabacum (common tobacco)
Pathway
nta03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
nta00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
107760475
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nta03019
]
107760475
Messenger RNA biogenesis [BR:
nta03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
107760475
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ndc1_Nup
Motif
Other DBs
NCBI-GeneID:
107760475
NCBI-ProteinID:
XP_016434013
UniProt:
A0A1S3X2U5
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Position
Un
AA seq
558 aa
AA seq
DB search
MSLSIVERSLFKDKDGGSTVIKHRFLGFLIWQALQSTAVFFLSKTLLLSLFTPTPFKPSF
LSLFAFIVFHFSLLIFSTSLFIISSPRPHRAASPLELLLGSVKLILVPISSSQPLLSSDF
RLRARVSLSYVLFVAVSAVSTSLSMISLCWSCGAFDQVKTRRLVIGKLGFWGLQLGMFYA
VHYVYKKRWVLQFPIIQRPPFFSFKMGLPLAVGKALKLSAVGYVFSALLAVFLPYEFKGQ
LPVGNFITEQIIFYIGSFVVILCWELSHHLHQVLHTKRSVFAPPKGSAAAETNPSEPLLA
ALEESTPKSLLQYLAYLDLCMACESNVDPWRRAAFFEESGETYKRVISVCLTPVEQFTRN
ISEVLESSPVDNSLQLSHQLRSPNEQLADSKIYESFDDFQLLAWCARIVASLTVHSHKED
RFGVAQLSGSNAAVLSTLLSSLLVVETLMGKKTNLPSSNSVMDPAGIKWATLNSGRRDSA
AGVAGKRKGSPFYAKAYSMADILRTSIYCIVSAFYDEMSHGAKAGLLEKDWIISSKPLYG
TRELLSQKLRLFLDYQAT
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atgtctttatccatagtggagcgatcactcttcaaagacaaagacggcggctccaccgtc
atcaaacaccggttcctagggttcctaatctggcaagcacttcaatccaccgccgtcttc
ttcctttccaaaactctactcctttctctcttcactccaacccctttcaaaccctcattc
ctcagtctcttcgctttcatagttttccacttctctcttctcatcttttccacttccctt
ttcattatctcctctcctcggcctcatcgcgctgcttctcctttggagcttttgctcggc
tcagttaagctgatattggttcctatttctagttcccagccgctactctcctccgatttc
cggctccgcgccagggtttcccttagctacgtgctattcgtggcggtgtctgccgtatcg
acttctttgtctatgattagtttgtgctggagctgtggtgctttcgatcaagtgaagact
aggcggctggttattggaaagttagggttttggggtttgcagcttggaatgttttacgcg
gtccactatgtgtataagaaacgctgggttttgcagttcccgattatccagcgtcctccc
tttttcagctttaagatggggctacctttagctgttggaaaagctctcaagctttcagct
gttggttatgtcttttcagctctccttgcggtttttctaccttacgagtttaagggtcaa
cttcctgtaggaaactttattactgagcagattatcttttacatcggaagttttgtggtg
attctctgctgggaattatctcatcatttacaccaagtgttgcatacaaagcggtctgtc
tttgcccctccaaaaggttctgcagctgccgagacaaatccaagtgaaccgcttcttgcc
gcattggaggagagcacaccaaaatctcttctgcagtatcttgcttaccttgatctttgc
atggcatgcgagagtaatgttgacccttggcgccgagctgccttctttgaggaaagtggt
gagacatacaaaagagtaatttctgtatgcttgacccctgttgaacagttcacgagaaac
ataagtgaagttttggagagctctccagttgataactccttgcaactgtctcatcagttg
cgttcgccaaatgaacagcttgctgattcaaagatttatgaatcatttgatgactttcag
ctactagcctggtgtgctcgcattgtggcatcactgaccgtgcattcacacaaggaggat
aggtttggcgttgctcaactttctgggagcaatgcggctgttctctcaactttattgtcc
agtttattggttgttgaaactctaatgggcaagaaaaccaacttaccatcatcgaattct
gtaatggatcctgctggtattaagtgggctacattaaactcaggaaggagagattcagct
gcaggtgttgcaggaaaaagaaaaggatcccctttttatgcaaaagcttattcgatggct
gatatcctgaggacttccatctactgtattgtctctgctttctacgatgagatgtcgcat
ggtgccaaggcagggctgctcgagaaggattggataatcagtagtaaaccgctgtatgga
actcgtgagctcctttcacagaaattgaggctgttcctggactaccaagctacctag
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