KEGG   Nicotiana tabacum (common tobacco): 107760475
Entry
107760475         CDS       T04643                                 
Name
(RefSeq) uncharacterized LOC107760475
  KO
K14315  nucleoporin NDC1
Organism
nta  Nicotiana tabacum (common tobacco)
Pathway
nta03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:nta00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    107760475
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:nta03019]
    107760475
Messenger RNA biogenesis [BR:nta03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     107760475
SSDB
Motif
Pfam: Ndc1_Nup
Other DBs
NCBI-GeneID: 107760475
NCBI-ProteinID: XP_016434013
UniProt: A0A1S3X2U5
LinkDB
Position
Un
AA seq 558 aa
MSLSIVERSLFKDKDGGSTVIKHRFLGFLIWQALQSTAVFFLSKTLLLSLFTPTPFKPSF
LSLFAFIVFHFSLLIFSTSLFIISSPRPHRAASPLELLLGSVKLILVPISSSQPLLSSDF
RLRARVSLSYVLFVAVSAVSTSLSMISLCWSCGAFDQVKTRRLVIGKLGFWGLQLGMFYA
VHYVYKKRWVLQFPIIQRPPFFSFKMGLPLAVGKALKLSAVGYVFSALLAVFLPYEFKGQ
LPVGNFITEQIIFYIGSFVVILCWELSHHLHQVLHTKRSVFAPPKGSAAAETNPSEPLLA
ALEESTPKSLLQYLAYLDLCMACESNVDPWRRAAFFEESGETYKRVISVCLTPVEQFTRN
ISEVLESSPVDNSLQLSHQLRSPNEQLADSKIYESFDDFQLLAWCARIVASLTVHSHKED
RFGVAQLSGSNAAVLSTLLSSLLVVETLMGKKTNLPSSNSVMDPAGIKWATLNSGRRDSA
AGVAGKRKGSPFYAKAYSMADILRTSIYCIVSAFYDEMSHGAKAGLLEKDWIISSKPLYG
TRELLSQKLRLFLDYQAT
NT seq 1677 nt   +upstreamnt  +downstreamnt
atgtctttatccatagtggagcgatcactcttcaaagacaaagacggcggctccaccgtc
atcaaacaccggttcctagggttcctaatctggcaagcacttcaatccaccgccgtcttc
ttcctttccaaaactctactcctttctctcttcactccaacccctttcaaaccctcattc
ctcagtctcttcgctttcatagttttccacttctctcttctcatcttttccacttccctt
ttcattatctcctctcctcggcctcatcgcgctgcttctcctttggagcttttgctcggc
tcagttaagctgatattggttcctatttctagttcccagccgctactctcctccgatttc
cggctccgcgccagggtttcccttagctacgtgctattcgtggcggtgtctgccgtatcg
acttctttgtctatgattagtttgtgctggagctgtggtgctttcgatcaagtgaagact
aggcggctggttattggaaagttagggttttggggtttgcagcttggaatgttttacgcg
gtccactatgtgtataagaaacgctgggttttgcagttcccgattatccagcgtcctccc
tttttcagctttaagatggggctacctttagctgttggaaaagctctcaagctttcagct
gttggttatgtcttttcagctctccttgcggtttttctaccttacgagtttaagggtcaa
cttcctgtaggaaactttattactgagcagattatcttttacatcggaagttttgtggtg
attctctgctgggaattatctcatcatttacaccaagtgttgcatacaaagcggtctgtc
tttgcccctccaaaaggttctgcagctgccgagacaaatccaagtgaaccgcttcttgcc
gcattggaggagagcacaccaaaatctcttctgcagtatcttgcttaccttgatctttgc
atggcatgcgagagtaatgttgacccttggcgccgagctgccttctttgaggaaagtggt
gagacatacaaaagagtaatttctgtatgcttgacccctgttgaacagttcacgagaaac
ataagtgaagttttggagagctctccagttgataactccttgcaactgtctcatcagttg
cgttcgccaaatgaacagcttgctgattcaaagatttatgaatcatttgatgactttcag
ctactagcctggtgtgctcgcattgtggcatcactgaccgtgcattcacacaaggaggat
aggtttggcgttgctcaactttctgggagcaatgcggctgttctctcaactttattgtcc
agtttattggttgttgaaactctaatgggcaagaaaaccaacttaccatcatcgaattct
gtaatggatcctgctggtattaagtgggctacattaaactcaggaaggagagattcagct
gcaggtgttgcaggaaaaagaaaaggatcccctttttatgcaaaagcttattcgatggct
gatatcctgaggacttccatctactgtattgtctctgctttctacgatgagatgtcgcat
ggtgccaaggcagggctgctcgagaaggattggataatcagtagtaaaccgctgtatgga
actcgtgagctcctttcacagaaattgaggctgttcctggactaccaagctacctag

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