Nicotiana tabacum (common tobacco): 107760996
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Entry
107760996 CDS
T04643
Name
(RefSeq) protein TRANSPARENT TESTA 9 isoform X1
KO
K19513
protein CLEC16A
Organism
nta
Nicotiana tabacum (common tobacco)
Brite
KEGG Orthology (KO) [BR:
nta00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nta04131
]
107760996
03029 Mitochondrial biogenesis [BR:
nta03029
]
107760996
Membrane trafficking [BR:
nta04131
]
Autophagy
Mitophagy
PINK1-Parkin associated proteins
107760996
Mitochondrial biogenesis [BR:
nta03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-dependent mechanism factors
107760996
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FPL
CLEC16A_C
Motif
Other DBs
NCBI-GeneID:
107760996
NCBI-ProteinID:
XP_075077717
LinkDB
All DBs
Position
9:36259994..36310703
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AA seq
847 aa
AA seq
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MWFSFWRSRDRFSLDEFRFLTDQLMKVQVVNEVNKDFVIEALRSIAELITYGDQHDVAYF
EFFMEKQVMGELVRILRISRTVIVSLQLLQTMSIVIQNLKNEHSIYYMFSNEHINHLITY
SFDFRNEELLSYYISFLRAISGKLNKNTISLLVKTLNEEVVSFPLYVEAIRFAFHEESMI
RTAVRALTLNVYHVGDEAVNKFVASAPHADYFSNLVKFFGEQCISLDKLVVNASKCLGPD
TSGSIISSVDEIEDNLYYFSDVISAGIPDIGRLITDLMLKVLIFPSILPSLRMEVVKDSD
TGIGTATSLYLLCCILRIVKIKDLANIVAVALLCDIETFVPKSEAKLNGFMVNHGMSHEN
QDSENGGFRSDSDGQTLRVLIPNISSSLNGHPEDDIPQPDHGSSHSALWEALLSYITTGD
DVQVLGSLSVLATLLQTKELEESMLDALGILPQRKQQKKLLLQALVGEGSAEEQLFSSEN
MVKDGICSEMDCYLQKLKEQYGLLCVCKEVTVSPRIHRLQVLDALVSLFCRSNISAETLW
DGGWLLRQLLPYSEADFNGHHLRLLKDSFHSCTSCILDESKGTWPDLLIMVLCEEWRNCK
RIIEASSPRKDPKSMLLPSHKSLSEEPASGESSFTAGERLCEMVKVFVLLRQLHIFSVGK
VLPDQPPIHPTVDVMESFRAKRAGVDSLGPKPSVELSLVDAVPCRIAFERGKERHFHFLA
ISVGSSGWIILADELPLRPSYGVVRVVAPLGGCNPRIDEKHLRWLHLRIRPSSFPCIDAA
KVTAHARVKSKALVDGRWTLAFRDEESCKAAFSMIHEELKLLSNEVERRIKPMLDIERTN
NTKTADS
NT seq
2544 nt
NT seq
+upstream
nt +downstream
nt
atgtggttctccttttggagatccagagatcggttctccttggatgaattcagatttttg
acggatcagttgatgaaggttcaagttgttaatgaggtcaacaaggattttgtgattgag
gcactaagatcaattgcagagttgataacatatggtgatcaacatgatgtggcctatttt
gagtttttcatggagaagcaggtgatgggggagcttgtacgtatattaagaattagtcga
actgttattgtttcgcttcagttgttgcagacgatgagtattgtgatccagaacttaaaa
aatgagcactctatttattacatgtttagtaatgagcacattaaccaccttataacatat
tcttttgactttcgtaatgaagagcttttgtcttattacatatcctttctaagagcaata
agtggaaagttgaacaaaaacaccatttcccttcttgtgaagactcttaatgaagaagta
gtctcattcccactctatgttgaggcgatacgctttgcctttcatgaagaaagcatgatt
cgaactgcggtacgtgcgctaaccctgaatgtatatcatgttggcgatgaggcggttaac
aagtttgttgccagtgctcctcatgccgattatttctcaaatttggtcaaatttttcggg
gagcaatgcatcagcttggacaagttggttgttaatgcttcaaagtgtctgggtccagat
actagtggttctatcatttcctctgttgatgagattgaggacaacctatattactttagt
gatgttatttcagcagggattcctgacattgggaggctcataacagacctcatgttgaag
gtgctgatatttccatcaatacttccttcattacggatggaagtagttaaagacagtgat
acaggaattggaaccgcaacttctttatatttactttgttgcatcttacgcattgttaag
ataaaagatttggcgaatattgttgctgttgctcttctttgtgatatagaaacattcgtc
ccaaagtctgaagctaaactgaatggtttcatggttaaccatggtatgtcacatgaaaat
caagattcagaaaatggtggcttcagatcggattctgatggtcaaactttacgggtttta
attccaaacatatccagctctttaaatggtcacccagaagatgatattccgcaaccagat
catgggagttcacattctgcattatgggaggccttactttcttatattactactggtgat
gatgttcaagttttgggttctttaagtgtgctggctacactattgcagactaaagagctg
gaagaatcaatgcttgatgctcttggaattcttccacaaagaaaacaacagaagaaactc
ttgctgcaagctttggttggtgaaggatctgctgaagagcaacttttttcctcagaaaat
atggtaaaggatggaatatgtagtgaaatggattgctacctccaaaagttgaaggagcag
tatggattgttatgcgtgtgcaaggaggttacagtgagccctcgcatacatagacttcaa
gtactggacgcattggtcagtctattctgcaggtcaaatatctctgcagaaacattgtgg
gatggtggttggcttttgcgccagttgcttccatacagtgaggcggattttaacggtcat
catcttagattattgaaagattcattccacagttgtaccagctgtattcttgacgaatca
aaaggaacttggcctgatttgctaattatggtactttgtgaagagtggaggaactgcaaa
agaataattgaagcttcttctcctaggaaagatcccaaatccatgcttttgccatcacac
aagtccctttctgaagaacctgcttctggggaatcatcttttactgctggtgaaaggttg
tgcgagatggttaaggtgtttgtattacttcgtcagcttcatattttttcagtaggaaaa
gtgttgcccgatcaacctcctatacatcctacagttgatgtcatggaatcattccgagca
aaaagggctggcgttgacagtttgggtccaaaaccaagtgttgaattaagtcttgttgat
gcggttccttgtagaattgcatttgagaggggcaaagaacgtcatttccactttttagcc
atctctgtaggatcctccggatggattatccttgcagatgaattacctttgaggccaagc
tatggtgtggttcgtgttgttgctcctctgggtggttgcaaccccagaattgacgagaaa
cacctgagatggttacaccttcgaatacgtccatcatctttcccttgcatagatgcagca
aaggttacggcccatgcgagagttaagtcaaaagctttggtcgatgggaggtggactctg
gcttttcgagatgaggaatcttgcaaagctgctttttctatgattcatgaagagttgaag
ttactgagcaatgaggttgagagaagaataaaacctatgcttgacattgaaagaactaat
aatactaaaacggcagactcttaa
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