Nicotiana tabacum (common tobacco): 107761015
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Entry
107761015 CDS
T04643
Name
(RefSeq) E3 ubiquitin-protein ligase SIRP1
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
nta
Nicotiana tabacum (common tobacco)
Brite
KEGG Orthology (KO) [BR:
nta00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nta04131
]
107761015
04121 Ubiquitin system [BR:
nta04121
]
107761015
Enzymes [BR:
nta01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
107761015
Membrane trafficking [BR:
nta04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
107761015
Ubiquitin system [BR:
nta04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
107761015
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
Zn_ribbon_19
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-rbx1
zf-RING_UBOX
zf-C3HC4_3
zf-ANAPC11
Zf_IFT144_1st
zf-RING_5
FAR1_N
Motif
Other DBs
NCBI-GeneID:
107761015
NCBI-ProteinID:
XP_016434654
UniProt:
A0A1S3X401
LinkDB
All DBs
Position
19:complement(19349264..19351569)
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AA seq
342 aa
AA seq
DB search
MDGRGASRYWCHQCSRRVDPTLEVELKCPICQQGFVEEMGSETALENDFGGSDSDRALSL
WAPILLGMMSNPRRRSRFRHHLEFDSDDDDDHTREGGETELDPELASIMNRRRRNSTTIL
QLLQSIRAGMENADGENSREAGRDGEERVILVNPFNQTIIVQGSYDSDNNDRPIGSLGDY
FIGPGLDMLLQHLAENDPNRYGTPPAQKEVVEALPAVKIDETMQCSVCLEDFEIGTEAKE
MPCKHKFHSGCILPWLELHSTCPVCRHQLPSDESKVGNVTDNTNAAQSSDTRNENGRRFP
VSLPWPLSGLFSSGTQSSNGNSSSTTTSSSGNANSNAHMHDD
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atggatggaagaggagcatcaagatattggtgtcatcagtgttcaaggagggtggacccc
acgttggaggtggagttaaaatgtcccatttgtcaacaaggttttgtcgaggaaatggga
tcagaaactgcccttgaaaatgattttggagggtctgactccgatcgggccctatcactt
tgggcgccaatcttgttaggcatgatgagcaatcctcgtcgtcgctctaggtttaggcat
catctcgaatttgatagtgatgatgatgatgatcatactcgtgaaggtggggagacagaa
cttgatcctgagctggcatctataatgaataggcggaggaggaactccaccactattctc
cagctcttgcaaagtattcgagctggaatggagaatgctgacggtgaaaatagtagggag
gcaggtagggatggcgaggagcgtgtgatacttgtaaatccattcaatcaaaccatcatt
gtgcagggttcttatgattcggataataatgaccgacccattggctcattgggtgattat
ttcattggtcctggtttagacatgttgctgcaacatttggctgagaatgatccgaatagg
tatggtactccaccagctcaaaaagaggttgtagaggcgttgcccgcggtgaaaattgat
gagacgatgcagtgttccgtgtgcttggaagactttgagattgggactgaagccaaagag
atgccttgtaagcacaagtttcatagcgggtgtatcttaccgtggttggagcttcatagt
acctgtccagtctgtaggcatcagttaccctctgatgaatcaaaagttgggaatgtaact
gataacacaaatgctgctcagagtagtgatacaaggaatgaaaatggtcgacgttttcca
gtgtcgcttccatggcctttgagtggtttgttttcatcaggtacccaatctagtaatgga
aattcatcatcaacgactacttcttcatcaggaaatgcaaactcaaatgctcatatgcat
gatgattag
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