Nicotiana tabacum (common tobacco): 107761023
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Entry
107761023 CDS
T04643
Name
(RefSeq) probable polygalacturonase At3g15720
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
nta
Nicotiana tabacum (common tobacco)
Pathway
nta00040
Pentose and glucuronate interconversions
nta01100
Metabolic pathways
Module
nta_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
nta00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
107761023
Enzymes [BR:
nta01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
107761023
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Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Motif
Other DBs
NCBI-GeneID:
107761023
NCBI-ProteinID:
XP_016434661
UniProt:
A0A1S3X4B2
LinkDB
All DBs
Position
Un
AA seq
570 aa
AA seq
DB search
MRGSCRVHEEGMSGKRVLVLNMGLRPIFHFSRFGAQGEAMFGRFFKENIGVSQLRALFRN
YKHHKCKTKVANSNLISEAQMSQMRQNISKCELPTFAKAANFFAIAKIPQFSIALQLRCQ
SCKCGYSIHHKCDPFVENAKSQPPTHARECQLLFAKARLANASQTSQMRNLQTNTRNSSD
RVSNFLVFVTSFILHQGLAAIFDVTTYGAIGDGVTDDSQAFQQAWLDVCYDCENPTFLLS
PILFQGPCNSTTINIQVLGNITAPQNLREWVGCENDSWLYFTGISGLIINGTGQINGQGA
AWWNISGPAQKVNGTCHKPTTMHFNFCNDLELSGLNLVNSSRNHISITFSTGVNISNITK
TAPEDSPNTDGIDLSMSTTQVQILNSTFQTGDDCISINTGCSDINITGISCGPGHGISVG
SLGINETFAAVENINVTNCTFQGTQNGVRIKTWQGGMGYARFINFENINLTNVRNPIIID
QFYCNGAHNCGIEPNAVQVSNVTYKDIFGTTPSKIAINLNCSDNCTACTNLVFEQINITS
VLPEKQTLVSCNNAHGQANSTLPPITCLLT
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atgcgagggagctgtcgcgttcacgaagaaggaatgtctggaaagagagttttagttctg
aatatgggacttcgtcccattttccatttttcccgatttggagctcagggagaggcaatg
ttcgggagatttttcaaggaaaatatcggggtgtcgcaattgcgagctctttttcgcaat
tacaaacatcacaaatgcaaaacaaaggtcgcaaattcaaaccttatatcagaagctcaa
atgtcgcaaatgcgacaaaatattagcaaatgtgaactgcccaccttcgcaaaagcggcc
aacttcttcgcaattgcgaagataccccaatttagcattgcattgcaattgcgatgccag
agttgcaaatgcggatacagcatccatcacaaatgtgaccccttcgtcgaaaatgcgaag
tcccagcccccaacccatgctcgcgaatgccaactattgtttgcaaaagcaaggctcgca
aatgcgagccagacctcgcaaatgcgaaatctgcagacaaacactagaaatagcagtgac
agagtttccaactttctagtttttgttacttcatttattcttcaccaaggtctagctgct
atttttgatgtcacaacttatggtgctatcggagatggagtaactgatgattctcaagct
tttcaacaagcttggctagatgtatgctatgattgtgaaaatccaacattcttgttgagc
cctatattatttcaaggcccttgcaattctaccactattaatatacaggttttagggaat
atcacggcaccccaaaatttaagagaatgggtagggtgtgaaaatgatagttggctttat
ttcactgggatatctggtctcatcatcaatggcactggtcaaattaatggtcaaggcgct
gcctggtggaacatttctggtcccgctcaaaaggtcaatgggacttgccacaagccaacg
actatgcactttaatttttgtaatgatcttgaattgagtggactgaaccttgttaatagt
tcaagaaaccatataagcattacttttagcacaggggtaaatatctccaatatcactaaa
actgcacctgaagatagccccaacactgatggtattgatctctctatgtctaccactcaa
gttcaaattctgaattccacttttcaaacaggtgatgattgcatttccatcaatacggga
tgttctgatataaatattactggtatttcatgtggaccaggacatggtataagtgtagga
agcctaggaattaatgagacttttgctgctgtggagaatataaatgtaacaaattgtacc
ttccaaggaacacaaaatggtgtaagaatcaaaacatggcagggtggtatgggctatgcc
agatttataaattttgagaatatcaacctcacaaatgttcgtaatcccatcattatcgac
caattctattgcaatggtgctcataattgtggaattgagccaaatgcagtccaagtgagt
aatgtaacatacaaggatatatttgggacaacaccaagcaaaatagctataaatctgaat
tgcagtgacaactgcacagcttgcaccaacttagtatttgagcaaattaatataacctca
gttttgcctgaaaaacaaactcttgtatcttgtaataatgctcatggacaagccaattca
actttacccccaataacatgcttgttaacataa
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