Nicotiana tabacum (common tobacco): 107761039
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Entry
107761039 CDS
T04643
Name
(RefSeq) zinc finger CCCH domain-containing protein 41-like
KO
K13192
RNA-binding protein 26
Organism
nta
Nicotiana tabacum (common tobacco)
Brite
KEGG Orthology (KO) [BR:
nta00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
nta01009
]
107761039
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nta03019
]
107761039
03041 Spliceosome [BR:
nta03041
]
107761039
Protein phosphatases and associated proteins [BR:
nta01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
107761039
Messenger RNA biogenesis [BR:
nta03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
107761039
Spliceosome [BR:
nta03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
107761039
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
Nup35_RRM_2
Nup35_RRM
zf_CCCH_4
zf-CCCH
Motif
Other DBs
NCBI-GeneID:
107761039
NCBI-ProteinID:
XP_016434688
UniProt:
A0A1S3X4Q1
LinkDB
All DBs
Position
Un
AA seq
766 aa
AA seq
DB search
MGSFSRTPSDSYQMMRLNQSLSGHAGPGRGRGRESGAWGPCESRFSTIDVASQFVPQGPI
NPLLYTGRGPQNVSSGQGAPWNAFGIVPAIPNGGLDTLHTLGLQGTLRTSLNPAMTMGIP
RQRCRDFEERGFCLRGDMCPLEHGVNRIIVEDVQSLSKFNLPVSLPGAHMLGPVTAQGSL
PAIGPSSSLANKALHNKSINPPVIDNGLGLTDTFGGGSVAGGADFYDPDQPLWSNDHPEN
SAALLDVNRSKIDDAGTMLDADSSDQDQVALCDGFKLKRLNRDAGAASGSQSIQGVNRHG
KQTNVDTIDPQMMESSSEPQSSSGRNMRKPSQKALRTLFVSGIPQKDNKPEALLSHFQKF
GEVIDIYIPMNGERAFVQFSKREEAEAALKAPDAVMGNRFIKLFWANRDRIMDNGASGSS
NFPLAPRGGTRSTVPPHLLVPHKRKDNLQTVARKTAEHGTVAPLATSDLPKPVAQNGLKT
TPPLKKKLETLELLKEEMRKKQEMLEQKRNEFRRKLDKLEKQAVGVKDEAAPDQAMNKPK
GGGTVSNSGKVENSIPVEPSNTVSSPPSEATPDSSRSTENAEPNCSKSSSTVATHDASNL
KQSIRPLAPVGAPFILNRYKLDNRPTAFKLLPPLPSALANVDVLKEHFSTFGDPPSVELE
DLEPQDCNNGTEVQNTSAKISFRSRRSAERAFQNGKSWQGQILHLMWVQSSNPAKDVGVG
ENVTPASKQPSDANGQSNAKIGVAGLPEGSVAGNHEPDNQGRREDE
NT seq
2301 nt
NT seq
+upstream
nt +downstream
nt
atgggttctttttccaggacaccttcagattcgtatcagatgatgaggctaaatcagtcc
ctgtctggtcatgctggtcctggtaggggtcgaggaagagaatctggtgcttggggtccg
tgtgaatctaggttcagcactattgatgttgcgtctcaatttgttccacaaggccctatt
aatcctcttctttatactggaagggggccgcaaaatgtttccagtggacagggtgcgcct
tggaatgcgtttggaatagttccagcaatacctaatggtggtcttgatacacttcatacc
cttggtttacagggaacgcttagaacgtccttgaatcctgccatgactatgggcattcca
aggcaaaggtgtagagactttgaggagcgtggtttttgcctaagaggagatatgtgccct
ctggagcatggagtaaatcgcatcattgttgaagatgttcagagcctttctaagtttaat
cttcctgtttcacttcccggtgctcatatgctgggaccagttactgcacaaggatcttta
cctgcaataggcccctcaagctcattggctaataaagctttacataacaaaagtatcaac
cctccagtgattgacaatggattaggtttgactgatacttttggtggtggttctgtggct
gggggagctgatttctatgatcctgatcagcctttatggtcaaatgatcatcctgaaaat
tcagcagcactcttggatgtaaatcggtctaaaattgatgatgcggggacgatgctggat
gcagactcctctgatcaggatcaggttgcgctttgtgatggctttaaacttaagcgtcta
aatagagatgctggagcagcttcaggatctcaaagcattcagggtgtaaaccgtcatggt
aagcaaacaaatgtagataccatagacccgcaaatgatggaatcatcttcagagccccaa
agtagttctggacgcaatatgcgaaaaccatctcaaaaggcactccgtactctatttgta
agtgggattccacagaaagacaacaaaccagaagctcttctttcacattttcaaaaattc
ggggaggttatcgacatttacatcccgatgaatggtgaacgagcttttgttcaattttct
aagagggaagaagctgaggctgctttaaaagcaccagatgctgtgatgggcaaccgcttt
ataaagcttttctgggcaaacagggatcgcattatggataatggagcaagtggtagtagt
aattttccattagctccccgcggtgggacacgcagtacggttccaccccatctattggtt
cctcataaaaggaaagacaatctgcagactgtagcccgaaaaactgctgaacatggtact
gttgctccgttagccacctctgatctgcccaagcccgtggctcagaatggtctcaaaact
acaccacctttgaagaaaaaactggaaactttagaacttctgaaggaagaaatgcgcaag
aagcaggagatgcttgagcaaaagcgtaatgagttccgacgcaagttggataaacttgag
aagcaagctgtgggtgtgaaagatgaagcagcgccagatcaggctatgaacaaaccaaag
ggaggaggaacagtttccaactctggtaaagtggaaaattcaatccccgtagaacctagt
aacactgtgtcatcaccaccatctgaagcaacaccagatagtagcagatctacagagaat
gccgaacccaattgttcaaaatcatcttcgactgttgcaacgcatgacgcttcaaacttg
aagcagtcaattcgtccattggcaccggtgggcgcaccttttatcttaaatagatacaaa
ctagataaccgccccaccgcattcaagctccttccacctctaccaagtgctctggcaaac
gttgacgtcctgaaggagcacttttctacttttggtgatcctccttctgttgagctggaa
gatttggaacctcaagattgtaataatggcacagaggtgcaaaatacatctgctaagata
tctttccgatcacgtcgttctgctgaaagagcatttcagaatggtaaatcctggcaaggc
caaattctgcatcttatgtgggtgcaatccagtaatcctgcaaaggatgttggtgttgga
gaaaatgtcactccagcttcaaagcagccttcagatgctaatgggcaatccaatgcaaaa
attggtgtggcaggtctaccggaaggaagtgtggcagggaaccatgaacctgacaatcaa
ggaagaagagaagatgaatga
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