Nicotiana tabacum (common tobacco): 107761102
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Entry
107761102 CDS
T04643
Name
(RefSeq) LOW QUALITY PROTEIN: general transcription factor IIH subunit 2-like
KO
K03142
transcription initiation factor TFIIH subunit 2
Organism
nta
Nicotiana tabacum (common tobacco)
Pathway
nta03022
Basal transcription factors
nta03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
nta00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
107761102
09124 Replication and repair
03420 Nucleotide excision repair
107761102
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nta03021
]
107761102
03400 DNA repair and recombination proteins [BR:
nta03400
]
107761102
Transcription machinery [BR:
nta03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
107761102
DNA repair and recombination proteins [BR:
nta03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
107761102
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ssl1
C1_4
VWA_2
Zn_ribbon_GTF2H2
IBR
VWA
Motif
Other DBs
NCBI-GeneID:
107761102
NCBI-ProteinID:
XP_075081166
UniProt:
A0AC58S853
LinkDB
All DBs
Position
11:complement(49219838..49227988)
Genome browser
AA seq
419 aa
AA seq
DB search
MNNEEKRFNREEEDEDEESGRGREAWERTYADERSWESLQEDESGLLRPIDNKTLSHAQY
RRRLRTATAARVQKGLIRYLYIIIDFSRAAAEMDYKPSRMVVVAKQVEAFVREFFDQNPL
SQIGLVILKDGVAQCLTDLGGSPEAHIKALMGKLGTSGDASLQNGLDLVCDLLNQIPSYG
HREVLILYSALSTCDPGDILETIQKCKASKIRCSVIGLSAELYICKHLCQETGGMYFVAL
MRXEXIIEPHLKELVLEHAPPPPAIAEFAVANLIKMGFPQRAAEGVISICSCHKEAKVGG
GYTCPRCKARVCELPTECCICGLTLVSSPHLARSYHHLFPIRPFDDVSPSLLKDIHKLPK
NCFGCQQSLLNPGNLPGLQVACPNCKQHFCLDCDIYIHESLHNCPGCESLNSKTISDME
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgaacaatgaagaaaaacgatttaaccgagaagaagaggatgaggatgaggaaagtggg
agaggtcgagaagcgtgggaaagaacttatgcagatgaacgatcatgggagtctttgcaa
gaggatgaatctggactccttcgtccaattgacaacaaaactctatcccatgctcagtat
cgccgacgtctccgcactgcaaccgctgcccgagttcagaagggcctgattcgctacctt
tacattatcattgatttctccagggcagctgcagaaatggattataaaccaagccgaatg
gttgtagttgctaagcaagtggaggcgtttgtaagagaattttttgatcagaatcccctc
agtcagattggcttggtgatcttgaaagatggagtagctcagtgtttaacagatcttggt
ggcagtccggaggctcatatcaaagcattgatgggtaaattggggacgtcaggtgatgca
tcccttcaaaatggcctagatcttgtgtgtgacctcctaaatcagatcccatcatatggt
catcgtgaagtccttatcttgtattctgctcttagcacatgtgatccgggggatatactc
gaaaccatccagaaatgtaaagcgtctaagataaggtgctcagtaattggtctctctgcc
gaactctatatatgcaagcatctctgccaagagactggtggaatgtattttgttgcgttg
atgaggtgagaatgaattattgagcctcatttaaaagagttggtattagagcatgcccca
cctcctccagcaattgcagagtttgctgttgcaaatttgatcaagatgggattcccccaa
agagcagcagagggtgttatttcaatttgttcatgtcataaagaggctaaggttggtggt
ggatacacttgtccgagatgcaaagcacgcgtatgtgagctgcctactgaatgttgtatc
tgtggactgacccttgtgtcttctccacatttggcaaggtcatatcaccatctgttccca
ataaggccatttgatgatgtttcaccctcacttctgaaagatattcacaagttaccaaag
aattgctttggttgccagcaaagtctcctaaatcctggaaatttgccaggtctacaggtt
gcttgtccaaattgcaaacaacacttctgccttgattgtgatatttatatacatgagagc
ttgcacaattgtccaggttgtgagagcttaaattccaagaccattagtgatatggaatga
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