Nicotiana tabacum (common tobacco): 107762477
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Entry
107762477 CDS
T04643
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 57
KO
K14779
ATP-dependent RNA helicase DDX52/ROK1 [EC:
5.6.2.7
]
Organism
nta
Nicotiana tabacum (common tobacco)
Brite
KEGG Orthology (KO) [BR:
nta00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
nta03009
]
107762477
Enzymes [BR:
nta01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
107762477
Ribosome biogenesis [BR:
nta03009
]
Eukaryotic type
90S particles
Helicases
107762477
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
ParD_antitoxin
T4SS-DNA_transf
P-loop_SecA
SLAM
UTP25_NTPase-like
Motif
Other DBs
NCBI-GeneID:
107762477
NCBI-ProteinID:
XP_016436328
UniProt:
A0A1S3X981
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All DBs
Position
Un
AA seq
536 aa
AA seq
DB search
MEKDASFLFGGITFNRKKFATDFDRFKGHKTSDNSLEKLELVENEKSEMEDATNTCVGKK
RKRKEKGTVPALVLDSVDGFSVFKNSKLKKEAASEENDQSANELLEGKKEYHRQLERDAL
FRKLHGIHVSGSNVPSPLHSFAELRSRYKCRLYLLRNLAELGFKEPTPIQRQAIPVLLSG
RECFACAPTGSGKTFAFVFPILVKLKDTSNDGVRAVILSPTKELAAQTTRECRKLAKGKK
FYIRLMTKKLAKSGDFSKLRCDILISTPLRLQFAIRKGKLDLSRVEFLVLDESDKLFEPG
LLEQVDFVVNACTNPSILRSLFSATLPDIVEDRARTIMHDAVRVIIGRKNSASETIKQKL
VFVGSEEGKLLALRQSFAESLNPPVLVFVQNKERAKELYDELKLEDFRADVIHSDLSQTQ
RENAVDNFRAGKTWVLIATDVVSRGMDFKGVNCVLNYDFPDAAAAYIHRIGRTGRAGRRG
EAITFYTEADIPFLRNIANVITSSGGEVPEWIMSMTKKKWKKHRPQRETISTQPDI
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaagatgcatcttttttgttcggcggcatcactttcaatcgtaaaaagtttgcc
accgattttgacaggtttaaggggcataaaacaagtgacaactcattagagaagctggag
ttagttgagaatgaaaaatccgaaatggaagatgcgacaaatacctgtgttggtaagaag
aggaagagaaaggagaagggaacagttcctgcattggttttagactcagtggacggattc
tccgttttcaaaaattcgaaattgaaaaaggaagctgccagtgaagagaatgatcaatct
gcaaatgaactgcttgagggaaaaaaagaatatcatcggcaattggagagggatgcactt
ttccggaagttacacggcattcatgtttctggaagtaatgtcccttcgccattgcacagt
tttgcagaattaagatcaagatataaatgtcgattatatctattacgcaacctggcagaa
ctgggattcaaagaaccaacaccaatccaaagacaggctattccagtcctcttatctgga
cgggaatgctttgcttgtgcacctactggttctggaaaaacatttgcttttgtctttcca
atacttgtgaaactcaaggatacttcaaatgatggtgtccgagctgtaattctttcccct
acaaaagagttagctgctcagactacaagagaatgcagaaagttggctaaagggaagaag
ttctacatcaggttgatgactaaaaagctcgctaaaagtggagacttttctaaattgcga
tgtgatatactcatctcgacaccattgcgcttacagtttgctatccgcaaaggaaagctt
gatttaagtagggttgaatttcttgtcttagatgaatcggataagctttttgagcctggc
ttgctagagcaggttgattttgtggtgaacgcgtgcacaaatccttcaattcttcggtcg
ttgttcagtgctactttacctgatatagttgaagacagagcgcgtacaataatgcatgat
gctgttcgagtcattattggtaggaaaaattctgcttccgaaacaataaagcaaaagttg
gtattcgtagggagtgaagaaggaaaacttctagctcttcgtcaaagctttgcagagagt
ttgaatccaccggtgctagtattcgttcaaaacaaggagcgcgcaaaggagctatatgac
gaactaaaattggaagattttcgagctgatgttatccattcagatctttctcagacacag
agagaaaatgctgttgataactttagagctggaaaaacatgggttctaattgccacggat
gtggtgtcccggggaatggatttcaaaggggtcaactgcgtattaaattatgattttcca
gacgctgctgcagcatacattcacagaattggacgtaccggaagagcaggaaggagagga
gaggctattacattttatactgaagcagatattccttttttgaggaacatagcaaatgtt
attacttcttctggtggtgaggttcccgagtggatcatgtcaatgaccaagaaaaagtgg
aagaaacacaggccacaaagagaaaccatttcaactcagccagatatatga
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