Nicotiana tabacum (common tobacco): 107762500
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Entry
107762500 CDS
T04643
Name
(RefSeq) putative transcription elongation factor SPT5 homolog 1
KO
K15172
transcription elongation factor SPT5
Organism
nta
Nicotiana tabacum (common tobacco)
Pathway
nta03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
nta00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
107762500
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nta03021
]
107762500
03019 Messenger RNA biogenesis [BR:
nta03019
]
107762500
Transcription machinery [BR:
nta03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
107762500
RNA polymerase I system
107762500
Messenger RNA biogenesis [BR:
nta03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
107762500
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
KOW1_SPT5
KOW2_Spt5
KOW4_SPT5
KOWx_SPT5
KOW5_SPT5
KOW
KOW7_SPT5
DUF4438
Motif
Other DBs
NCBI-GeneID:
107762500
NCBI-ProteinID:
XP_016436346
UniProt:
A0A1S3X8X9
LinkDB
All DBs
Position
Un
AA seq
420 aa
AA seq
DB search
REVTKKKAVIPPPRLMNIDEARVLNIRVERKRDMRTGDYFDNIGSMSFRDGFLYKSVAMK
SISTQNIHPTFDELERFRRPGESGDGDMASLSILFANRKKGRFMKGDRVIVVKGDLRKME
GHVEKVEEDTVHIRPNQKGLPVETLAFSDKEIRKHFEPGNHVKVICGSSEGATGIVASVE
GHVVNLVSDTTKEPLSVFADNVVLSSEVTSGLTRIGEYELHDLVILDNKSFGVIIRVDSE
AFQVLKGVPDRPDVALVRLREIKGKVEKRGNAQEHFKNQLAVKDVVKVIEGPCKGKQGHV
EHIFRGVIFIYDRHHLEHAGFICAKTQSCVVIGGSRANGDRNGNPFSSRFAHFRTPPRAP
QSPMRSSRGGPPMSYGGRHRGGRGHDALVGVDVKIRLGTFKGCKGRVVDIKGTSVRVGPR
NT seq
1264 nt
NT seq
+upstream
nt +downstream
nt
aagggaagtcacaaagaagaaggcagtaattcctccgccacgcttaatgaatattgatga
agctagagtgttgaatatacgtgtggagcgtaagcgagacatgaggactggtgactattt
tgacaatattggaagtatgtcgttcagagatggtttcttgtataagtcagtggcgatgaa
atcaatcagcactcagaacatacatccaacttttgatgaacttgagagatttcgccgacc
tggtgagagtggggatggcgatatggctagtctatctattttgtttgcaaataggaaaaa
gggtcgttttatgaagggtgaccgtgttattgtggtgaaaggggatctcaggaaaatgga
aggtcatgttgagaaagttgaggaagataccgttcatatcagaccaaatcagaaaggcct
tcctgtggaaactctggcttttagtgataaagagatacgcaagcactttgagcctggaaa
tcacgtgaaagtaatatgtggttcatctgaaggcgcaactggtattgttgcatccgttga
ggggcatgtggtgaacttggtatcagatacaacaaaggagcctctcagtgtgtttgccga
taatgttgttcttagttctgaagtaacatctggtctcactcgtattggggagtatgagct
ccatgaccttgtaatactagacaataagagctttggtgtgattatacgtgtagacagtga
agccttccaggtccttaagggagtgcctgataggcctgatgtagcacttgttagacttag
agagatcaaagggaaagttgagaagagagggaacgcgcaagagcacttcaagaaccaatt
agcggtcaaagacgtggtgaaagttatcgagggtccttgcaaaggaaaacaaggtcatgt
agaacacatcttcagaggagttatttttatttatgatcgccatcaccttgagcatgctgg
ttttatttgtgccaaaactcaatcttgtgtggtgattggtggctcaagggcaaatggtga
tagaaatggtaaccccttctcatcaagatttgcacatttcagaacaccaccccgtgctcc
tcaatctccaatgagatcgtctagaggtggcccgcccatgagctatggaggcagacatag
aggtgggagagggcatgatgctttagttggagttgatgtgaaaattcgccttgggacctt
taaaggttgtaaggggcgtgttgttgatatcaaaggaacttcagtccgagttgggcccag
atga
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