Nicotiana tabacum (common tobacco): 107762638
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Entry
107762638 CDS
T04643
Name
(RefSeq) katanin p80 WD40 repeat-containing subunit B1 homolog
KO
K18643
katanin p80 WD40 repeat-containing subunit B1
Organism
nta
Nicotiana tabacum (common tobacco)
Brite
KEGG Orthology (KO) [BR:
nta00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
nta04812
]
107762638
Cytoskeleton proteins [BR:
nta04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
107762638
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40
Beta-prop_THOC3
Katanin_con80
WD40_Prp19
Beta-prop_EML_2
WD40_CDC20-Fz
WD40_Gbeta
WD40_WDHD1_1st
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR3_2nd
EIF3I
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
WDR55
Beta-prop_TEP1_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_EML
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
Beta-prop_SPT8
Beta-prop_DCAF4
WD40_MABP1-WDR62_1st
Beta-prop_EIPR1
Beta-prop_SCAP
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
Beta-prop_Aladin
NBCH_WD40
eIF2A
Beta-prop_RIG_2nd
Beta-prop_IFT122_1st
Beta-prop_WDR41
Beta-prop_IFT140_1st
WDR90_beta-prop_4th
Beta-prop_ACSF4
Beta-prop_VPS8
Beta-prop_WDR19_1st
Beta-prop_Vps41
Beta-prop_WDR75_2nd
Motif
Other DBs
NCBI-GeneID:
107762638
NCBI-ProteinID:
XP_016436494
UniProt:
A0A1S3X9L0
LinkDB
All DBs
Position
Un
AA seq
1027 aa
AA seq
DB search
MAKRGYKLQEFVAHSGNVNCLRFGKKTRRQFLTGGDDQTVNLWSIGKPTSTASLSGHTSP
VESVAFDSAEVLVLAGSSSGVIKLWDLEETKMVRTLNGHRSYCTACEFHPFGEFFASGSM
DTNLKLWDIRKKGCIHTYKGHTRGISTIRFSPDGRWVVSGGFDNVVKVWDLTAGKLLHDF
KSHEGHVRSIDFHPLEFLLATGSADRTVNFWDLETFELIGSTRREAAGVRSMTFHPDGRT
LFCGLDDSLKVYSWEPVICHDSVEMGWSTLSDLCIHDGKLVGGAYYQNYVGVWVADISLI
EPYGAGLTPERQSNLEQKQEHVECRLERVGSNRSSNSSLRCTSPDIDSKEIKNIYVDSEN
PVTIKKVTSHSPKVAPPSDYKENKKQSSQKLNSANDLPAKTNGLAVSKSFIVPSVVPRDI
PEAKNLDTCRRESITANRASGGISQKPSHIKRLSNNKFDMEKISVTLESESADKLPCTVD
CKNESDIDSRRMTDNSSRECSEAKDSAVKHGGEKPEKVSLLSPPNNQENRNVALEGRKEL
NPVKFVNGVAVVRGRTRSLVERFEKREGLNMDDILKLDAVSHSKTEEVEISPLAPSCCKD
EEPETFIKKKDEEPETTPSTASRFKAEEATRPLPPSHSGIEEANTCTLPASQYEVEELEA
SNKPDSKFKSEEVKTTHLPASHVEKLEASPMPASQFESEEVRASHLPVSCSKAEEFEASP
KPASQVKSEDVRKSRLPASRSKAEELEASPVPSSQIKPENVRRSRLPASRPKAAELEASP
MPVSKFRTGARTSRLSAFRSKTEEAKTSRLLASRSKAEEAQTFRLLSSGSNAEEPLTAPL
LNTDQQTIAQCESAQNDNFVIEDLMQSHDVLLSSFRSRLTKLQVVHHFWERNDIRGAINA
LRKLPDHSVQADVVSVLVDKMEIITLDLFSCLLPVLLTLLDSKVERHANVSLELLLKLVA
VFGPVVRSAILAPPSVGVDLHAEERIQCCKQCFVYLQDIQKVLPALIRRSGLLAKGALQL
NLLLQES
NT seq
3084 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaacgtggctacaaattgcaggaatttgtggcgcattcggggaatgtaaactgt
ttaagatttgggaagaagacacgtaggcagtttctcactggtggagatgatcaaactgtg
aatctttggtccattggtaaaccaacatccaccgccagcctaagtggtcacacgagtcca
gtagaatctgtagcttttgactcagcagaggttctagtgcttgctggatcttcatcaggt
gtaataaagctatgggatctggaagaaacaaaaatggttcgcactcttaatggacacaga
tcgtattgcacggcttgtgaattccatccttttggtgaattttttgcatctggatctatg
gacactaatcttaagttatgggatataagaaagaaagggtgcatccatacatacaaaggt
cacactcgaggaataagtaccattagattctctcctgatggccgctgggtggtttctggt
ggatttgacaatgttgtgaaggtatgggacctaacagctggaaagctcttgcatgatttc
aagtcccatgaagggcatgttcgatctatagatttccatccacttgagtttcttctggca
acaggttctgcggaccgtactgtaaacttttgggatttggaaacatttgaattgattgga
tctaccagacgtgaggctgcaggagtacgatcaatgacctttcaccctgatggaaggact
ctgttctgtggactggatgatagcttgaaggtttattcatgggagcctgtaatttgtcac
gactccgttgaaatgggatggtcaactttaagtgatctctgcatacatgatgggaagctt
gtaggtggtgcctattaccaaaactatgttggtgtttgggttgcagatatttcgcttatt
gagccctatggagctggtttaactccagagagacaaagtaacttggagcagaaacaggaa
catgtggagtgtcgtctagaaagagtaggaagcaacagaagttctaattcaagtctgcgc
tgcacatcacctgacattgattccaaagaaataaagaatatatatgtggatagtgaaaat
cctgtaaccataaagaaagttacttctcattctccaaaagtggcccccccttcagattat
aaggaaaacaagaaacagtcgagccagaagcttaattctgccaatgatttacctgcaaaa
actaatggattggcagtaagtaaatcatttatcgtccccagtgttgtgcctcgtgatatt
ccagaggcaaagaacttggatacttgtagaagggaatctattactgcaaacagggcaagt
ggtggtatatcacaaaagccgtctcacataaagcgcttgtccaacaacaaattcgatatg
gagaagatttctgtgactcttgagtctgaatctgctgacaagttgccttgtacagtagat
tgtaagaacgaatcagatattgatagcaggcgtatgacagataatagttccagggaatgt
tctgaggcaaaagattcagctgtcaagcacggtggagaaaagccagagaaagtatcattg
ctatcaccgccaaataatcaggagaaccgtaatgtggccttggaaggcaggaaagagtta
aatccggttaaatttgtgaatggagtggcagtagtgcgaggaaggacacgcagtttggtt
gagagatttgagaaaagagaagggttgaacatggatgatatccttaagctagatgcggtg
tctcattctaaaactgaggaagtagaaatatcccctttggcaccttcctgttgtaaagat
gaggaaccagaaacctttatcaaaaaaaaagatgaggaaccagaaacaaccccttcgaca
gcttctcgttttaaagcagaggaagcaacacggcctttgcctccatctcattctggaatc
gaggaagcaaatacatgtactttgccagcttctcaatatgaagttgaggaattagaagca
tccaataagccagattctaagtttaaatctgaggaagtaaaaacaacccatttaccagct
tctcatgttgagaagttagaagcatctcctatgccagcttctcagtttgaatctgaggaa
gtaagagcatctcatttaccagtttcttgttccaaagctgaggaatttgaagcttcccct
aaaccagcttcacaggttaaatccgaggatgtaagaaaatcccgtttaccagcttctcgt
tcaaaagctgaggaattagaagcatcccctgtgccatcttcacagattaaacctgagaat
gtaagaagatcccgtttgccagcttctcgtcctaaagctgcggaactggaagcatcccca
atgcctgtttctaagtttagaaccggagcaagaacatcccgtttgtcagcttttcgttca
aaaacagaggaagctaaaacatcacgtttattagcttctcgttctaaagctgaggaagca
caaacattccgcttgttgtcttctggttctaatgctgaggaaccattaacagcccctttg
ctgaatacagatcagcagactattgcacagtgtgagtcagctcagaatgataattttgtt
attgaagatcttatgcagagccatgatgtgctactaagttcgtttagatctcggctgaca
aagctgcaggtagttcatcacttttgggaacggaatgacattaggggtgctataaatgcc
ttgaggaagttgccagaccattccgtacaagccgatgttgttagtgtcctcgtagataaa
atggagattatcacattggatttgttttcctgcttgctgcctgtactgttaaccttactt
gatagtaaggtagaaaggcatgcaaatgtttccctggagctgctgttgaaacttgttgca
gtctttgggccggtagttcgctcagccattttagcacctccatctgtaggggttgatctt
catgcagaagaaagaatccagtgctgcaaacagtgcttcgtctatctccaagatatacag
aaagtacttccagcacttattaggagaagtggtctgttggcaaaaggtgcattacaatta
aatctcctacttcaagaatcgtag
DBGET
integrated database retrieval system
