Nicotiana tabacum (common tobacco): 107762762
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Entry
107762762 CDS
T04643
Name
(RefSeq) LOW QUALITY PROTEIN: elongation factor 1-alpha
KO
K03231
elongation factor 1-alpha
Organism
nta
Nicotiana tabacum (common tobacco)
Pathway
nta03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
nta00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
107762762
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nta03019
]
107762762
03016 Transfer RNA biogenesis [BR:
nta03016
]
107762762
03012 Translation factors [BR:
nta03012
]
107762762
04131 Membrane trafficking [BR:
nta04131
]
107762762
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
nta04147
]
107762762
Messenger RNA biogenesis [BR:
nta03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
107762762
Transfer RNA biogenesis [BR:
nta03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
107762762
Translation factors [BR:
nta03012
]
Eukaryotic type
Elongation factors
107762762
Membrane trafficking [BR:
nta04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
107762762
Exosome [BR:
nta04147
]
Exosomal proteins
Proteins found in most exosomes
107762762
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
GTP_EFTU_D4
FcpA
FlpD
AAA_22
Semialdhyde_dhC
Motif
Other DBs
NCBI-GeneID:
107762762
NCBI-ProteinID:
XP_075090174
UniProt:
A0AC58SYY9
LinkDB
All DBs
Position
17:20074445..20077263
Genome browser
AA seq
489 aa
AA seq
DB search
MGKEKVHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL
DKLKAERERGITIDIALWKFETTRYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT
GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKK
VGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQINEPKRPTDKPLRLPLQD
VYKIGGIGTVPVGRVETGVLKPGMLVTFGPTGLTTEVKSVEMHHEALQEALPGDNVGFNV
KNVAVKDLKRGYVASNSKDDPAKGAASFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKF
AEILTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFAEYPPLGRFAVRDMRQT
VAVGVIKNVDKKDPTGAKVLVLCLVCQVAVLRTGYLTGGGELDLSLVFIVLRRCLGFPRQ
LRIFAIFVA
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atgggtaaagagaaggttcacatcaacattgtggtcattggccatgtcgactctgggaag
tcgaccaccactggtcacttgatctacaagcttggtggtattgacaagcgtgttattgag
aggtttgagaaggaagctgctgagatgaacaagaggtcattcaagtatgcctgggtgctt
gacaaacttaaggctgaacgtgagcgtggtatcaccattgatattgccttgtggaagttc
gagaccactagatattactgcactgtgattgatgcccctggtcacagggactttatcaag
aacatgatcactggtacctcccaggctgactgtgctgtcctgattattgactccaccact
ggtggttttgaagccggtatttccaaggatggccagacccgtgagcatgcattgcttgct
ttcacccttggtgttaagcaaatgatttgctgttgtaacaagatggatgctaccaccccc
aagtactccaaggctaggtatgatgaaatcgtgaaggaagtttcttcctacctcaagaag
gttggttacaaccctgacaagattccctttgtccccatctctggtttcgagggggacaat
atgattgagaggtctaccaaccttgactggtacaaggggccaaccctccttgaggctctt
gaccagattaatgagccgaagaggcccacagacaaacccctacgtcttccacttcaggac
gtttacaagattggtggtattggtaccgtccctgttggtcgtgttgaaacaggtgtcctc
aagcctggtatgcttgtgacctttgggcctactggtctgacaactgaagtcaagtctgta
gagatgcaccacgaagctctccaggaggcactccctggtgacaatgttgggttcaatgtt
aagaatgttgctgttaaggatctcaagcgtggttatgttgcctcaaactccaaggatgac
ccagccaagggggctgccagtttcacctcccaggtcatcatcatgaaccatcctggtcag
attggaaatggatatgcaccagttctcgactgccacacttcccacattgctgtcaagttc
gctgagatcttgaccaagattgacagacgttctggtaaggaacttgagaaggagcctaag
ttcttgaagaatggtgatgctggtatggttaagatgattccgaccaagcctatggttgtt
gagaccttcgctgagtacccaccattgggtcgttttgctgtgagggacatgcgtcagact
gttgctgttggtgtcatcaagaatgttgacaagaaggacccaactggtgccaaggttctg
gttctctgccttgtatgtcaggtagctgttctcagaactgggtacttgacaggcggtggt
gagcttgacttgagtcttgtcttcattgtgttgaggaggtgccttggttttccacggcag
ctcaggatttttgctatttttgttgcctaa
DBGET
integrated database retrieval system
