Nicotiana tabacum (common tobacco): 107763389
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Entry
107763389 CDS
T04643
Name
(RefSeq) probable pectate lyase 5
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
nta
Nicotiana tabacum (common tobacco)
Pathway
nta00040
Pentose and glucuronate interconversions
nta01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
nta00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
107763389
Enzymes [BR:
nta01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
107763389
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
107763389
NCBI-ProteinID:
XP_016437369
UniProt:
A0A1S3XC15
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Position
Un
AA seq
404 aa
AA seq
DB search
MGIPIIFLLLLALLAPLFTFSTSVAVPDPEVIVQQVNDKIFNASRRNLGYLSCGTGNPID
DCWRCDPNWEKNRQRLADCAIGFGKQAIGGRDGKIYIVTDTSDDPVNPKPGTLRYGAIQD
EPLWIIFARDMVIKLKEELILNSFKTIDGRGASVHIAGGPCITIQYVTNIIIHGLNIHDC
KQGGNAYVRDSPEHYGWRTLSDGDGVSIFGGSHVWVDHCSLSNCRDGLIDAIRGSTAITI
SNNYMTHHNKVMLLGHSDSFTRDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTH
WEMYAVGGSASPTINSQGNRFLAPNDIFNKEVTKHEDAAESEWKNWNWRSEGDLMLNGAF
FTRSGAGASKSYAKASSLSARPSTLVSSITVNAGALGCKKGKRC
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atgggaataccaattatcttccttctccttcttgctcttttagctcctctcttcacgttc
tcaacgtctgtggctgttcctgaccctgaagttatagtccaacaagttaacgacaaaatt
ttcaatgcatcaagaaggaacttaggctatttatcatgtggaacaggcaaccccattgat
gattgctggagatgtgaccccaattgggaaaaaaacaggcaaagattagctgattgtgcc
attggatttggcaaacaagccattggtggaagagatggcaaaatttacatagtcactgat
actagtgatgaccctgtaaatccaaagccaggaactttaagatatggtgcaattcaagat
gaacccctttggattatatttgcaagagacatggttattaagctaaaagaagagttaatt
ttgaattcattcaagacaattgatggtagaggtgctagtgtacacattgctggtggtcca
tgtattactatacaatatgttacaaatattattatacatggattaaatattcatgattgt
aaacaaggaggaaatgcttatgttagagattcaccagagcattatggttggaggacatta
tcagatggagatggagtttctatatttggaggaagccatgtttgggttgatcattgttct
ttgtcaaattgtagagatgggttgattgatgcaattcgtggatctactgccattactatt
tccaataattacatgacacatcataataaggtaatgcttttgggacatagtgattcattc
actagggacaagaacatgcaagttaccattgcttttaaccattttggagaagggcttgta
caaagaatgccaagatgtagacatggatatttccatgtggtgaacaatgactacacccat
tgggagatgtatgcagttggaggaagtgcttctccaactatcaacagccaaggcaataga
tttcttgctcctaatgatatcttcaacaaggaggtgacaaaacatgaggatgcagcagaa
agtgaatggaagaattggaactggagatctgaaggagatttaatgcttaatggagctttt
tttactaggtctggtgctggagcttctaaaagttatgctaaagcttcaagtttaagtgca
aggccatctactttagttagttctattactgtcaatgctggtgcacttggctgcaaaaag
ggcaaaagatgctga
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