Nicotiana tabacum (common tobacco): 107763499
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Entry
107763499 CDS
T04643
Name
(RefSeq) DExH-box ATP-dependent RNA helicase DExH5, mitochondrial-like
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
nta
Nicotiana tabacum (common tobacco)
Pathway
nta03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nta00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
107763499
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nta03019
]
107763499
03012 Translation factors [BR:
nta03012
]
107763499
Enzymes [BR:
nta01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
107763499
Messenger RNA biogenesis [BR:
nta03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
107763499
Translation factors [BR:
nta03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
107763499
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
dsrm
DEAD
HA2_N
AAA_22
Dicer_dimer
AAA_19
ATPase
nSTAND3
NACHT
Motif
Other DBs
NCBI-GeneID:
107763499
NCBI-ProteinID:
XP_016437469
UniProt:
A0A1S3XCB9
LinkDB
All DBs
Position
Un
AA seq
889 aa
AA seq
DB search
MMLILRKAFLYAQVVIISGETGCGKTTQIPQFILESEIESAHGAMCSIICTQPRRISAMT
VSERIAAERGELLGETVGYKVRLEGVKGRDTHLLFCTTGILLRRLLIDRNLKGITHVIVD
EIHERGINEDFLLIVLKDLLPRRPELRLILMSATLDAKLFSSYFGGAPLVHIPGFTYPVR
THFLENILEMSGYRLTPDNQIDDYGQERTWKMNKQAPRKRKSQIASAVEDALRAADFKEF
SPVTQESLSCWNPDCIGFNLIEHILCHICENERPGAVLVFMTGWDDINSLKDKLQCHPIL
GNTSRVLLLACHGSMASTEQRLIFDKPEDGVRKIVLATNIAETSITIDDVVYVIDCGKAK
ETSYDALNNTPCLLPTWISKVSARQRRGRAGRVHPGECYHLYPRCVYDAFADYQLPEILR
TPLQSLCLQIKSLKLGSISEFLSRALQSPELLAVQKAIEYLKIIGALDESENLTVLGRYL
TMLPMEPKLGKMLILGATLNCLEPILTIVAGLSVRDPFLTPLDKKDLADAAKAHFSRDYS
DHLALVRAYEGWKDSERDLAGYEYCWKNFLSAQSMKAIDSLRREFYSLLKDTGLVDSNNT
IYNSWSYDEHLLRAIICYGLYPGICSVLHNEKSFSLKTMEDGQVLLHSNSINARDSRIPY
PWLIFNEKIKVNSVFLRDSTAISDSVLLLFGGTISKGEVDGHLKMLGGYLDFYMSPTIAE
MYRSLRRELDELIHTKLLNPRMDVHSYHELLSAIRLLISEDQCGGRFVFSRQVLLTSKPC
AAAAPPAPMSRTESGPGGENSKSQLQTLLNRAGYATPTYKTRQLNNNQFQATVEFNGMQI
MGQPCNNKKQAEKDAAAEALQWLLEGHRADPDYIERMSLFLKKSKTEHR
NT seq
2670 nt
NT seq
+upstream
nt +downstream
nt
atgatgctaatattaagaaaagcttttctgtacgcacaggtggttattatctcaggtgaa
actggctgtgggaagaccacacagattccccaatttattttagagtctgaaattgagtct
gctcacggagccatgtgcagtatcatatgtactcagccaagaagaatatctgctatgact
gtatctgaaagaattgctgcagagagaggggagttgttgggtgaaacagttggatataaa
gtgaggctagaaggtgttaaagggagggatactcacctcctcttctgtaccactggtatc
ttgttgagaagactactaattgacagaaatctgaagggcatcacacatgtaatcgtggac
gagattcatgaacgtggaataaatgaagactttctgctaatagttctaaaggatttactc
cctcgccggccagagttaaggttgattttgatgagtgccaccttagatgcaaagcttttc
tcttcatactttggtggggctccgctggtccacattccgggatttacatatcccgttcgc
actcatttcctcgaaaatattctggagatgtcgggatacagattgacgccagacaatcag
attgatgattatggtcaggagagaacgtggaaaatgaacaagcaagctccaagaaaaagg
aagagccagattgcttctgctgttgaggatgccctcagagctgctgatttcaaagaattt
agccctgtgacacaggagtctttgtcttgttggaatcctgattgtataggcttcaatctt
atagaacatattctatgccatatttgtgaaaatgaaaggcctggtgctgttttagttttt
atgactggttgggatgatataaattctctgaaggataagctacaatgtcatcctatcttg
ggaaataccagccgtgttctattgctggcatgccatggttctatggctagtacggagcag
aggttaatttttgacaagcctgaagatggagtgaggaagatagtgttggctacaaatatt
gctgaaaccagtatcacaattgatgacgtagtttatgttattgactgtggcaaggcaaaa
gagacgtcatatgatgcacttaataatactccttgtttgcttcctacttggatttcaaag
gtttcagctcgacaaagaaggggaagagccggacgtgttcatcctggagaatgctatcat
ctttatcccagatgtgtgtatgatgcttttgctgattatcaattaccagaaattctgagg
acccctttgcaatccctttgtttgcaaattaaaagtttaaaactcggtagcatctctgag
ttcctttcaagggctttgcaatcccctgagttattagcggttcaaaaagctattgagtat
ctgaaaattattggggctttagatgagagtgaaaatttgactgttctaggacgttactta
acgatgcttccaatggagcctaaactcggaaaaatgcttatacttggtgcaactttgaat
tgtttggagccgatattaactatcgttgctggtcttagtgtccgagatcccttcttgaca
ccgcttgacaagaaagatcttgcggacgctgctaaggctcatttttcacgcgattatagt
gaccatcttgctcttgttcgagcatatgagggctggaaggattctgaaagagacctagct
ggatatgagtactgctggaagaattttctgtctgcacagtctatgaaagctattgattct
cttcgcagggagttttactctttgctgaaggatactggtcttgttgacagcaataatact
atctataattcttggagttacgatgagcacctccttcgagcaattatctgctatgggttg
tatcctggaatctgttctgtcctgcataatgagaagtcattttcgttgaaaacaatggaa
gatggtcaggtgcttttacactcgaactccattaatgcccgggactccaggataccatat
ccctggctgatcttcaatgaaaagatcaaagtgaactctgtctttctccgggattccaca
gctatctccgactcagtgctgcttctatttggaggaaccatctcaaaaggagaagtggac
ggtcacttgaaaatgttaggtggatacttagacttctatatgagccctactatagcagaa
atgtatagaagtctaagaagagagcttgatgagttaattcatactaaactcctgaatccc
aggatggatgtacatagttatcatgaacttctgtcagcaatacggttgcttatctcagag
gatcaatgcggtggcagatttgtttttagtcgtcaggttttactaacttccaagccatgt
gctgcagcagcaccaccagctccgatgtcaaggactgaaagtggtccaggaggtgaaaat
tctaagtctcagctacagacgttgctgaatcgagcagggtatgcaacaccaacctacaag
acaaggcaacttaataacaatcagtttcaagcaactgtagagttcaatgggatgcagata
atgggacagccttgcaacaacaaaaaacaagctgaaaaagatgcagcagctgaggctctg
caatggttgttggaagggcaccgtgcagatcctgattacattgagcggatgtctctgttt
ctgaaaaagagcaagacagagcatagatga
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