Nicotiana tabacum (common tobacco): 107763539
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Entry
107763539 CDS
T04643
Name
(RefSeq) replication factor C subunit 1-like
KO
K10754
replication factor C subunit 1
Organism
nta
Nicotiana tabacum (common tobacco)
Pathway
nta03030
DNA replication
nta03410
Base excision repair
nta03420
Nucleotide excision repair
nta03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
nta00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
107763539
03410 Base excision repair
107763539
03420 Nucleotide excision repair
107763539
03430 Mismatch repair
107763539
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nta03032
]
107763539
03400 DNA repair and recombination proteins [BR:
nta03400
]
107763539
DNA replication proteins [BR:
nta03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
107763539
DNA repair and recombination proteins [BR:
nta03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
107763539
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RFC1
BRCT
AAA
Rad17
PTCB-BRCT
RCF1-5-like_lid
AAA_30
AAA_22
BRCT_2
AAA_19
AAA_5
RuvB_N
AAA_assoc_2
AAA_18
AAA_14
nSTAND3
AAA_16
NTPase_1
Gp44_lid
Zeta_toxin
Sigma54_activ_2
DNAX_ATPase_lid
Motif
Other DBs
NCBI-GeneID:
107763539
NCBI-ProteinID:
XP_016437511
UniProt:
A0A1S3XC64
LinkDB
All DBs
Position
Un
AA seq
998 aa
AA seq
DB search
MSDIRKWFMKQHDKGTGNGSMSKNSAPEKPSAEKSPPGNLVQEGQETAGRRKTSKYFATD
KVKAKEEKVEEVSAKRKAQNAGGSSSVNEKPPAAKRIHKAEDDDDFVLPASAMGSRGATP
TKKSASGSGRGSARKYVISDESDDDLKDTKSDPKPTGRGRGGRAAQTGGKGIPLDESDDD
ASADKDTKSGGRGRGGKGPSAAPSGGRGRGGGGRGGFMNFGERKDPPHKGEKEVPEGAPN
CLAGLTFVISGTLDSLEREEAEDLIKRHGGRVTGSVSKKTNYLLCDEDIEGRKSSKAKEL
GTAFLTEDGLFNMIRSSKKSKSATQPESKKSVATVVSPAKRNSQNTSDGTGSTATKILAA
KELTPSASPAKRKGQAKESSLPWTEKYRPKAIVDIIGNKSLVEQIQRWLESWDEHFLNAA
SKGKGKKQNDSGAKKAVLLSGMPGIGKTTSAKVVSQLLGFQTIEVNASDSRGKADSKIEK
GIGGSTANSIKELVSNESLGANIGRLHHQKTVLIMDEVDGMSAGDRGGVADLIASIKLSK
IPIICICNDRYSQKLKSLVNYCLPIVFRKPTKQQMAKRLKQVANAEGLQVNEIALEELAE
RVGGDMRMALNQLQYMSLSKSVIQYDDIRQRLLSSSKDEDISPFKAVELLFDFNAKNLKI
DRRIDLSMSDPDLVPLLIQENYLNYKPSSVGKDDDGLKRMSLIARAADSIANGDLINVQI
RRYQQWQLSPAGCLSSCIIPASLLHGQRQTLEQGERNFNRFGGWLGKNSTMGKNYRILED
LHVHLLASRESYLGRANLRLDYFTLLTKKLTDPLKLLPKDEAVENVVDFMDSYSISQDDF
DNIVEISKFKGHPNPLDGIQPVVKAALTRAYNKGSKSRVIRTADLISLPGIKKAPKKRVA
AMLEPLDEGLAEENGEAIAEDEENSSEPEDIDVEKKLESDLQSLNSKGIQVNVDLKGAGG
KKPSAGRGRGSSSSREKGGAESSSKRGGRGSGATKRKR
NT seq
2997 nt
NT seq
+upstream
nt +downstream
nt
atgtcagatatcagaaaatggttcatgaagcagcatgacaaaggtacgggtaatgggagt
atgtccaagaatagtgctccagaaaagccttcagcagaaaagtctcctccaggaaacctg
gtacaagaaggacaagagactgccggcagaaggaaaactagtaaatattttgctacagac
aaggtgaaggcaaaagaagaaaaagtagaggaagtatcagcaaaaagaaaagctcaaaat
gctggtggaagttcatcagttaatgagaagccaccagctgcgaaaagaattcacaaagct
gaggatgacgatgactttgtactgcctgcatctgcaatgggatccagaggtgccactccc
accaaaaagtcggcaagtggctctggaaggggatctgcacggaagtatgtgatcagtgat
gaaagtgacgatgatcttaaggatacaaaatctgatcccaaacctactggaagagggcgt
ggtggacgagcagctcagactggtggaaaaggcatccctcttgatgaaagtgatgatgat
gcctcagctgataaggacaccaaatctggtggacgagggcgtggtggtaaaggaccatct
gcagcaccaagtggtggacgaggcagaggtggtggaggacggggcggtttcatgaatttt
ggtgaaagaaaagaccctcctcacaagggggaaaaggaagttcctgaaggtgccccaaac
tgtttagctggtttgacttttgtaattagtggaactctggacagtttagaaagagaagaa
gctgaggatttgattaaacgccatggtggtcgtgttacaggatctgttagcaagaaaacg
aattatcttttatgcgatgaagacatcgagggacggaaatcctctaaagccaaggaactc
ggaactgcatttctcactgaggatggtttgttcaatatgatccggtcatcaaagaaatca
aaatcagctacacagcccgagtcaaagaaatcagtggccactgttgtttctcctgcaaag
agaaattcacaaaatacaagtgatggaactggaagcactgccacaaagattttagctgcc
aaagaattgacacctagtgcatctcctgccaagaggaaaggccaagctaaagagtcttca
ctaccatggacagaaaaatacaggcccaaagctattgtagacataatagggaataagtca
ctggtagaacagattcagcgttggctggagagctgggatgagcattttctaaatgcagct
agtaaggggaaggggaaaaaacagaatgactctggtgctaaaaaggcagttctgttgagt
ggtatgccgggtatagggaagactacatcagcaaaggtggttagtcagctactgggtttc
caaactatcgaggtaaatgctagtgatagtcgtggaaaggctgattcaaaaattgagaaa
ggaattggtggtagtactgcaaattccataaaagaacttgttagcaatgaatccctaggt
gctaatattggcagattgcaccatcagaagactgttctgattatggatgaggttgatggc
atgtctgctggagatagaggtggtgttgccgatcttattgctagcatcaagttatccaaa
attcctattatctgcatttgtaatgatcgctacagtcagaaattgaagagccttgtcaat
tattgcttaccaattgtcttccgaaaaccgactaaacagcagatggcaaaaaggttaaag
caagtggcaaatgctgaaggccttcaagtcaatgagattgctcttgaggaattggcagaa
cgtgttggtggcgatatgcgtatggctctaaatcaattgcaatacatgagtctctctaag
tctgtgatccaatacgatgatataagacagcgccttctaagcagttcaaaggatgaagac
atctcacccttcaaagctgtcgaactgttgtttgattttaatgccaagaacttgaaaata
gatcgaagaattgatctaagtatgagtgacccagatcttgtcccgcttcttatacaggag
aactatctcaattacaagccaagttctgttggcaaagatgatgatggtttaaagcggatg
agcctaattgcacgtgctgctgactctattgcaaatggtgatttaataaatgtacagatt
cgtagataccagcagtggcaactatctccagctggttgcctttcgtcttgcattattcct
gcttcgttgttgcatggacagaggcagactcttgagcagggagaacgcaactttaatagg
tttggtggctggctaggaaagaactctacaatgggaaagaattaccggattttggaggac
ttgcatgttcacctactcgcttctcgtgaatcatatttgggaagggcaaacctgagactt
gactactttactcttcttacaaagaagttgacagatccattaaaactgctacctaaggat
gaagctgtcgagaacgttgtggatttcatggattcgtactctataagccaggatgacttc
gataatattgtggagatatcaaaattcaagggacatccgaatccactggatggtattcag
cctgttgtgaaagctgcactgacaagggcatacaacaaaggaagcaaatcacgtgttatt
cgcacagcagatttaatatcccttcctggaattaaaaaagctcccaagaagcgggttgca
gcgatgctggagccactagatgaaggcttagctgaagaaaatggtgaagcaattgctgaa
gatgaagagaactcatcagagccagaggatatagatgttgagaaaaagttggagtcagat
cttcagagtctcaattctaagggaatccaagtaaatgtagatctgaagggtgctggtgga
aagaagccgtctgctggaagaggaagaggaagttctagtagcagggagaaaggaggtgct
gaatcctcgagcaagagaggtggccggggttctggagctaccaagagaaagaggtga
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integrated database retrieval system
