KEGG   Nicotiana tabacum (common tobacco): 107763847
Entry
107763847         CDS       T04643                                 
Name
(RefSeq) pre-mRNA-splicing factor SPF27 homolog
  KO
K12861  pre-mRNA-splicing factor SPF27
Organism
nta  Nicotiana tabacum (common tobacco)
Pathway
nta03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:nta00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    107763847
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:nta03041]
    107763847
   03400 DNA repair and recombination proteins [BR:nta03400]
    107763847
Spliceosome [BR:nta03041]
 Complex B
  Other components
   Prp19 complex
    107763847
 Complex C
   Prp19-CDC5 complex
    107763847
DNA repair and recombination proteins [BR:nta03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   PSO4 complex
    107763847
SSDB
Motif
Pfam: BCAS2 Plk4_PB2 ATPase HMMR_N THOC7
Other DBs
NCBI-GeneID: 107763847
NCBI-ProteinID: XP_016437836
UniProt: A0A1S3XDB9
LinkDB
Position
Un
AA seq 250 aa
MATINGDVLMIEAPPESRPAVTTTAEVIDALPYIDDEYGDPKMKEEVDRLVEEEMRRSSK
KPSDFLKDLPPLPKFNFENHPMLAREYERVRAGKPPVQINTSRYGLEVPPVNKRNDETAW
KQALQKAQRLLQHQVIRLENLDLMSKHGPDVWKLYNQRLEAIFARMQSQVVELNGKIETV
NRERKYHQQNTAYELNALSIQWRELCLKNMEIQSACVELEDQIEQLRTEARERGWDLDAN
IENGKIHVAE
NT seq 753 nt   +upstreamnt  +downstreamnt
atggcgacgataaacggcgacgttttgatgatagaggcgccgccggaatctcgaccggcg
gtgactacaactgcagaagtgattgatgcgttgccatatattgatgacgagtatggtgac
cccaaaatgaaagaagaagtagaccgtttggttgaagaagagatgcgccgcagctccaaa
aagccctcagattttctcaaagaccttcctcctcttccgaagttcaatttcgagaatcac
ccgatgcttgcaagggaatatgagcgggtgagagctggaaagcctccggtacaaattaat
acttcaagatatggacttgaagtgccacctgtgaataaacggaatgatgaaactgcatgg
aagcaagcacttcaaaaagctcaacgtttactgcagcatcaagtaatcaggctagaaaat
ttggacttaatgtcaaagcatggtccagatgtgtggaagctgtacaatcaacggctggaa
gcgatttttgccagaatgcaatcacaagtggttgaactgaatggaaagattgagaccgta
aacagggaaaggaaatatcatcagcaaaatactgcatatgagctcaatgctttgtccata
caatggagagagctttgtttgaagaacatggaaatccaatctgcatgtgttgaattggaa
gaccaaattgaacagctgaggacggaagctagagagaggggctgggatttggatgctaat
attgagaatggcaaaatccatgtggcagaataa

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