KEGG   Nicotiana tabacum (common tobacco): 107764057
Entry
107764057         CDS       T04643                                 
Name
(RefSeq) pinin-like
  KO
K13114  pinin
Organism
nta  Nicotiana tabacum (common tobacco)
Pathway
nta03013  Nucleocytoplasmic transport
nta03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:nta00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    107764057
   03015 mRNA surveillance pathway
    107764057
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:nta03019]
    107764057
   03041 Spliceosome [BR:nta03041]
    107764057
Messenger RNA biogenesis [BR:nta03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     107764057
Spliceosome [BR:nta03041]
 Complex C
  Other components
   EJC/TREX
    107764057
SSDB
Motif
Pfam: Pinin_SDK_memA
Other DBs
NCBI-GeneID: 107764057
NCBI-ProteinID: XP_016438066
UniProt: A0A1S3XDP2
LinkDB
Position
Un
AA seq 421 aa
MASAVGEKTEEELRKELFELNRQQREITERLKDPRGLRRGGFSGGGGPRSFVANGGRQRG
LVRPAERNDAEDQPAPKRRISSAVVKIEEGEIADDVSGAPTDANKEDSAVEEGSSREAHV
RQNERKPSNWLRRDGNQRPSKMDSDVPPPEPVPRVLPKNEDPKLVSRNKRMLGQLLGTLE
KFRKEDMQLSGSEAYMRRSDSLKRAEQRAREESEKLRQQEREQRDEKLKRDLTLRARLAA
KAEEKRLELLFLRWSEHHKKLANFIRTKAEPPIFYSFAKPLEEDPNLVEQKKDQIFQEWK
AARREDLSLYQKQIAEQYVANAEGEWKNILERRANRNPANLQETMDKELESHRLESGPKT
RKIPGVSNNEDEDVEDINVAEDDMMDDVLDLDDNNQRSDEIVKVEAGNGSTQIDNNDQPK
I
NT seq 1266 nt   +upstreamnt  +downstreamnt
atggcgagcgccgtaggggagaagacggaggaagagctccgcaaagaactctttgaactg
aatcgtcaacaacgcgagataactgagcggcttaaggatccaagaggtcttcgccgcggt
ggattctccggtggcggtggtcctcggagttttgttgccaacggcggccgccaacgtggc
cttgttagacctgcggagaggaatgatgcagaggatcagccagcacctaaaaggcgtatt
tcttcagctgttgtgaagattgaagagggggagattgctgacgatgtctctggagctcca
acggatgcaaataaggaagattcagctgtcgaggagggaagttcacgggaggcacatgtc
agacagaatgagagaaagccatccaattggcttcggagggatggcaatcaaagaccctca
aaaatggattctgatgttcctccaccggaacctgtgccgagagtgttgccaaaaaatgag
gatcctaaattggttagtaggaataagagaatgttgggacagctgctggggaccttggag
aagttccgaaaagaggacatgcagctttcagggagcgaggcttacatgcggaggtcagat
tctttgaaaagggctgagcaaagggcgcgtgaagaaagtgagaagttaagacaacaagag
cgtgagcagcgtgatgaaaagctgaaaagagatttgactcttcgagcacgtcttgctgct
aaagctgaggaaaagaggttggaattgctatttcttcggtggagtgagcaccacaaaaaa
ctagccaattttataaggaccaaagccgagcctccgatcttttattcttttgccaaacca
ttggaagaagatccaaacttagttgagcagaaaaaagatcagatattccaagaatggaaa
gctgcaaggagagaggatttgtcgctataccagaaacaaattgctgaacaatatgttgca
aatgctgaaggggagtggaaaaatattttggaaaggagagccaacagaaatccagcaaac
ctccaagagacaatggacaaggagctagagagtcataggcttgagagtggacccaagact
agaaagatccctggtgttagcaacaatgaagatgaggatgttgaggatatcaatgttgcg
gaggacgatatgatggatgatgtgcttgacctggatgataataaccagaggagtgatgaa
attgtaaaagttgaagcaggtaacggtagtacacagattgataacaatgatcagccgaag
atatga

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