Nicotiana tabacum (common tobacco): 107764144
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Entry
107764144 CDS
T04643
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit A-like
KO
K07466
replication factor A1
Organism
nta
Nicotiana tabacum (common tobacco)
Pathway
nta03030
DNA replication
nta03420
Nucleotide excision repair
nta03430
Mismatch repair
nta03440
Homologous recombination
nta03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
nta00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
107764144
03420 Nucleotide excision repair
107764144
03430 Mismatch repair
107764144
03440 Homologous recombination
107764144
03460 Fanconi anemia pathway
107764144
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
nta03000
]
107764144
03032 DNA replication proteins [BR:
nta03032
]
107764144
03400 DNA repair and recombination proteins [BR:
nta03400
]
107764144
Transcription factors [BR:
nta03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
107764144
DNA replication proteins [BR:
nta03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
107764144
DNA repair and recombination proteins [BR:
nta03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
107764144
MMR (mismatch excision repair)
107764144
DSBR (double strand breaks repair)
HR (homologous recombination)
107764144
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
DUF223
DUF936
Fer4_9
Motif
Other DBs
NCBI-GeneID:
107764144
NCBI-ProteinID:
XP_075102883
LinkDB
All DBs
Position
23:70593846..70598149
Genome browser
AA seq
908 aa
AA seq
DB search
MPPINLTEGAIAILTNGEAHPEDFKPVLQITDIRLVNTQNQNNNNERYRILLSDGEFLQQ
GMLATQKNDLIRSQQIQKGSIIQMNQFVCNNIQNRMIIIIIELDILLETCDTIGEPKHYL
PNGISPSVPRPAAPLQPSTNQSGGLSGSPQSFTAVAATSSSAPRPNMPGGMRSPESNRSI
GSNTSSAGNIDSGRYSSTSAPLYPKAESGPAISRAPMNNYVRPPQPSYQQHPQSSYQQPP
PLYSNRGPIAKNEAPPRIVPIAALNPYQGRWTIKARVTAKAELRHYNNQRGDGKVFSFDL
LDSDGGEIRVTCFNSVADQFYHQIEPGRVYLISKGSLRPAQKSYNHLPNDHEIMLESTSV
VQPCFEDDRTIPQQQFHFRPISDIEALENNSVVDVIGVVSSISPSSSIMRKNGTETQKRV
LQLKDMSGKSVELTLWGNFCNAEGQTLQSMCDSGASPVLAVKAGRVNDFNGKSVGTISTS
KLFIEPDFPEALKLKAWFEREGKNMPSVSLSREVSSIGRTDVRKTISQIKDERLGTSEKP
DWITISATVTFIKGENFCYTACPLMIGDRQCNKKVTNNGDGKWRCDRCDQTVDECEYRYI
LQFQIQDHTGLTWVTAFQECGDQIMGVSAKELYFLKYEGQDDDKFTDIMRNVLFNKFIFK
LKVKEEMFSDEQRVKSTVVKAEKLNFQSEIRFLLDLIDKNNGQESSTLPPKTDNATPTSG
YNNAGFGSRTIEPMNPVANYGGSNSSISRESGLQGNQQGQYGNQFTGSQFAPPGSTGMYM
SCNSCGGTGHSASNCPSIMSGQGQAYGGGFGNRVTSGMSSDGASGECYKCHQFGHWARDC
PGVSNAPPANNMTPASGMSSGGASSECYKCHQFGHWARDCPGVSSAPAANNMTPGRYGNP
PRQRVGGF
NT seq
2727 nt
NT seq
+upstream
nt +downstream
nt
atgccgccgataaacttgacggaaggcgcgatagcgattttaacgaacggcgaagcacat
ccggaggattttaaaccggtgttacaaatcacagatattcggttggtgaacactcagaat
cagaataacaataacgaacgctaccggattcttttatcggacggggagtttcttcagcaa
gggatgttagctacgcaaaaaaacgatcttattcggtcccaacagattcaaaaaggatct
attattcagatgaatcagttcgtttgtaataacatccaaaatcgaatgatcatcattatc
attgaattagatattttacttgagacatgtgataccattggagaaccaaagcattatctc
ccaaatggtattagtccttcagtgccacgaccagctgccccacttcagccttccaccaat
caatcaggtggtttaagtggcagccctcaatcctttactgctgttgcagctacttcaagc
tcagctccaagaccaaatatgcctggagggatgcgatctcctgagtcaaaccgtagcatt
ggttctaatacttcctctgctggtaatattgactctggaagatatagttcaacaagtgca
cccctttaccccaaagcagaatctggtccagcgatttcacgggctccgatgaataattat
gtgcggccacctcagccttcttatcagcagcatcctcagtcttcttatcagcagccaccg
ccgttgtactcaaacagaggacctatagccaagaacgaagcaccgccgaggattgttcca
attgctgctctcaatccatatcagggtcgatggactatcaaggccagggttactgctaag
gcagaactcagacactacaacaatcaaaggggtgatggaaaagtattctcttttgatctt
cttgattctgatggaggagaaataagagtaacatgctttaactctgtagctgaccaattt
taccaccagattgagccaggtagagtgtatttgatttccaagggtagcttgagaccagct
cagaaatcttacaatcaccttccaaatgaccatgaaattatgctcgagagcacatcagtg
gttcaaccttgttttgaggatgacaggactattcctcaacaacaatttcattttcggcca
atcagtgatattgaggccttggagaacaatagtgtggtagatgtgattggtgtggtgtct
tcaataagtccatctagctcaataatgaggaaaaatggtacagaaactcagaaaagagtt
ctccagctgaaggatatgtctggcaaaagtgttgaattaactttgtggggaaatttctgc
aatgcagaaggtcaaacacttcaaagtatgtgtgattctggagcttcccctgttttggca
gtcaaagctggtagagtaaatgattttaatggcaaatctgtaggtactatatctacaagc
aagttgtttatagaaccggattttcctgaagctttaaaactgaaggcatggttcgaaagg
gagggaaagaacatgccatcagtatctctttcccgagaagtgagcagcattggtcggaca
gatgtgcgaaaaactatatctcaaatcaaagatgaacgattgggcacttccgagaaacca
gattggatcacaataagtgccactgttacatttataaagggtgagaatttttgctatact
gcctgtcccctcatgataggagatcgacagtgcaacaaaaaagtgacaaataatggggat
gggaaatggcggtgtgacaggtgtgatcagactgttgatgaatgcgaatataggtacatt
cttcagttccagattcaggaccatactggcttaacctgggttactgcatttcaggaatgt
ggtgaccagatcatgggtgtgtctgcaaaagaactgtatttcctaaaatatgaagggcag
gatgatgataaatttacagatatcatgcgtaatgtcttattcaacaaatttatcttcaaa
ttgaaagtgaaagaagagatgtttagcgatgaacagcgcgttaagtcaacagtggtcaaa
gcagagaagctgaacttccaatcagagatccggtttctgttggatttgatagacaagaac
aatgggcaggaatccagtactctgcctcctaagacagataatgcaactccaacttcaggg
tataataatgctggatttgggagtagaaccatagaaccgatgaatcctgttgcaaattat
ggtggcagcaatagcagtatcagcagagaaagtggactgcagggaaatcagcaaggtcaa
tacggaaatcagtttactggctcgcagtttgctccacctggttctacaggcatgtatatg
agctgtaatagttgtggtggaacaggccatagtgcttcaaactgtccaagcatcatgagt
ggtcagggccaggcatatggaggtggctttggcaatagggtaacttcaggaatgagcagt
gatggtgcttctggtgagtgctataaatgccatcagtttggacattgggcaagagattgc
ccaggtgtaagcaatgcaccccctgccaataacatgacacctgcttcaggaatgagcagt
ggtggtgcttccagtgagtgttataaatgccatcagtttggacattgggcaagagattgc
ccaggtgtaagcagtgcacctgctgccaataacatgactcctggaagatatgggaatcct
ccaaggcaacgtgttggtggattttga
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