Nicotiana tabacum (common tobacco): 107764531
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Entry
107764531 CDS
T04643
Name
(RefSeq) HBS1-like protein
KO
K14416
elongation factor 1 alpha-like protein
Organism
nta
Nicotiana tabacum (common tobacco)
Pathway
nta03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
nta00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
107764531
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nta03019
]
107764531
Messenger RNA biogenesis [BR:
nta03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
107764531
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
Zn_ribbon_RanBP
MMR_HSR1
GTP_EFTU_D4
zf-Sec23_Sec24
Vps36-NZF-N
Motif
Other DBs
NCBI-GeneID:
107764531
NCBI-ProteinID:
XP_016438609
UniProt:
A0A1S3XFQ9
LinkDB
All DBs
Position
Un
AA seq
650 aa
AA seq
DB search
MPRKVNYGVNYEEDFDDYEDYGYDCDDGCGYAEEDGTPPETRSKQELDNAGVWRCPICTF
DNEDTMNACDICGVLRHPLVKNCAGSKENAVPFKFDPQSPDDSVLSGIIPSRLRPKADTD
KVLQLNVPSNNKQLSTEVKKDLAAEGHPSSYTSLAKDDLKDSDSSSKTRGNDGVTSNLND
MSISSKPRSVDTRKSDSATSSSKNKPQKGVQPPQKEDNFNQLNLAIVGHVDSGKSTLSGR
LLHLLGRISQKEMHKYEKEAKLRGKGPFAYAWALDESAEERERGITMTVGVAYFNTKCYR
VVLLDSPGHRDFVPNMISGATQADAAILVIDASIGAFEAGIDVTGGQTREHALLIKSFGV
DQIIIAINKMDAVGYSKERFDTIKNQLGSFLRSCKFKDSSVLWIPLSAMENQNLVTSPSD
ARLLSWFQGSCLLDAIDSLQPPQRDYSKPLVMPICDLVKSPSQGQVSVCGKLETGALQVG
DKVLVMPSREVATVRSLEHNSQVCNSTKAGDNVTVNLPGIDANRVMAGDVLCHPEYPVAV
TNHLELKILILDIAVPILIGSQLEFHVHHAKEAARVVRILSLLDPKTGKETKKSPRCLLA
KQNAIIEVVLQGMICVEEHSKCKALGRVSLRASGRTVALGLVTRVLEKNE
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
atgcctcgtaaggtaaattatggagttaattacgaggaagattttgatgactatgaagat
tatggttatgactgtgatgatgggtgcggttatgcagaggaagatggtacgccaccagaa
acaaggtcaaaacaggagttggataacgctggcgtttggcgttgtcccatttgcactttt
gataatgaagatactatgaatgcatgtgatatatgtggagtgcttcgtcatccattggtc
aaaaattgtgccggcagcaaagaaaatgcagtacctttcaagtttgacccccagtctcca
gatgattcagtactgagtggaataataccatccagattacgtcccaaagctgatactgac
aaggtcttacagttaaatgtcccatcaaataacaaacaactaagtactgaagttaaaaaa
gatttggctgctgaagggcatccaagctcatacacatcattagcaaaagatgatttgaag
gatagtgattcttcctcgaaaactaggggaaatgatggtgttacaagcaacttgaatgat
atgtctatatcatcaaagcctcgcagtgtggatactagaaagagtgacagtgcaacatca
agctcaaagaataagcctcagaaaggtgtacagcctcctcaaaaagaagataacttcaac
cagttaaatcttgcaattgttggccatgtggattctgggaagtcaacactgtcaggaagg
ttgctacaccttttggggcggatttcccagaaagaaatgcacaaatatgaaaaagaggcc
aagctacgaggaaaagggccgtttgcttatgcttgggcattggatgagagtgctgaagaa
agagagaggggaataactatgacagtgggcgttgcttactttaacacaaaatgttaccgt
gttgttctgcttgattctccaggtcacagggactttgtcccaaatatgatatcaggtgca
acacaagcagatgctgcaattctcgtaattgatgcttcaataggcgcatttgaagcaggg
attgatgttactggaggtcagacaagggagcatgcactacttatcaagagctttggagtg
gatcaaataataattgctattaacaaaatggatgcagtgggatactccaaagaacgtttc
gatacaattaagaatcaactaggatcatttcttcgttcttgtaagtttaaagattcatca
gtactctggattcccctcagtgccatggaaaaccaaaatttggtgacaagtccttctgat
gcaagattgttgtcctggtttcaaggttcttgccttttggatgcaatagactctctccaa
cctccccaaagagattactcaaagcctctagtaatgccgatatgtgatcttgttaaatca
ccgtcacaaggacaggtgtcagtatgcgggaagttggagacaggagctcttcaagttgga
gataaggttctagttatgccatcaagagaagtggcaacagtgcgttctttggaacataat
tctcaggtttgtaacagtacaaaagctggagacaatgtcactgttaatctaccaggtata
gacgcaaatcgtgtaatggcaggggatgtgctgtgccaccctgaatatcctgttgctgtt
acaaatcatttggaactgaagattcttatcctggatattgccgttccaattttgattggc
tctcagttggagtttcatgtacatcatgctaaggaggctgcaagagttgtgaggattttg
tcattgcttgatccaaagactggaaaggagaccaagaaatcacctcgatgtcttctagca
aagcagaatgctataatcgaggtggtcttgcaaggaatgatttgtgttgaagagcattct
aaatgtaaggctcttggaagggtgtccctcagggcatcaggaagaactgttgctcttggt
cttgtgactcgagttctagagaagaacgaatag
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