Nicotiana tabacum (common tobacco): 107765050
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Entry
107765050 CDS
T04643
Name
(RefSeq) uncharacterized protein LOC107765050
KO
K14325
RNA-binding protein with serine-rich domain 1
Organism
nta
Nicotiana tabacum (common tobacco)
Pathway
nta03013
Nucleocytoplasmic transport
nta03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
nta00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
107765050
03015 mRNA surveillance pathway
107765050
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nta03019
]
107765050
Messenger RNA biogenesis [BR:
nta03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
107765050
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Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_ACIN1
RRM_5
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
107765050
NCBI-ProteinID:
XP_016439128
UniProt:
A0A1S3XGV7
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Position
1:complement(214862781..214869830)
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AA seq
415 aa
AA seq
DB search
MAKPGRGRAASPSGSSSRSPSRSRSRSYSSRSSSSRSPSRSRSRSRSFSSSSSSGSSRSP
SPRPPPSQRKSPAGVSKRGRSPPPLSKKASPPPRKVSPTPESRVLHVDQLSRNVNENHLK
EIFGNFGEILHVQLVIDHVVNLPKGFAYVEFKTRIDAEKAQLHMDGAQIDGKIVHAKFTL
PERKKAPSPPRAAATISRRDAPRTDNAPVDLEKDGPKRQQELSPRRKPLSPPRRSPIGRR
GSPRREPDSPARRRAESPIRRRAGSPYRRGSPPAPRRRPASPVRRRSPSSPPRRYRTPPR
GSPRRIRGSPVRRRSPLPPRRRSPPRRARSPPRRSPVGRRSSRSPIRRPIRSRSRSISPR
RGRAPAARRGRSSSYSSSPSPRKAPRKISRSRSPRKPLRGRSPSNSDSSSSPRKP
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaaccaggccgaggccgtgcggcttcgccgtcaggctcgtcttctcgttctcca
tcgcggtctcgttctcgctcttactcttctcgctcctccagttcccgctctccctctcga
tctagatcccgctccagatcgttttcttcctcttcctcaagtggaagttctcgcagccct
agcccccgccctcctccttctcaacgaaaaagccctgctggagtatctaagcgaggccgt
tcaccaccgccactatctaagaaagcttctccacctccaaggaaagtctctccaactcct
gagtcacgtgtgcttcatgtggatcagctcagcaggaatgtcaatgaaaaccatctgaaa
gaaatatttggtaattttggtgaaattctgcacgtgcagttggtcattgatcatgttgtt
aaccttccaaaagggtttgcttatgttgagttcaagactagaattgatgctgagaaagcc
caactacacatggatggtgcacagattgatgggaaaatagttcatgccaagttcaccctg
ccagagcggaaaaaggctccctcaccaccaagggctgctgcaactatctcaagaagagat
gctccaagaactgataatgcccctgttgatttggagaaagatggaccaaaacggcaacaa
gagttatctcctcgtcgaaaacctctctctccacctcgaaggtctcctataggacgaaga
ggatctcctagacgtgagccagattctcctgcccgtcgacgtgctgagtctcctattcgt
cgtcgcgcaggttctccttataggcgtggcagtccaccagccccaaggaggaggcctgca
tctcctgttagacgacgttcaccatcctctccaccaagacgttatcgaacacctcctagg
ggctctcccagaagaattcgtggcagtcctgttcgaagacgttctccccttccgccaagg
cgacgttctccaccacgacgtgctagaagtccacccagaagatctccggttggtcgccgg
tctagccgctcacctattaggagacctatccgttcacgatcaagatccatctctcctagg
cggggaagggctccagccgcaagacgtgggaggtcatcatcctactcttcttctcccagt
cctcgaaaggcaccccgcaagatttcaaggagtcgtagtcctagaaagcctttaagaggg
aggagccccagcaacagtgacagcagcagttcgcctcgtaagccctag
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