Nicotiana tabacum (common tobacco): 107765235
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Entry
107765235 CDS
T04643
Name
(RefSeq) nuclear pore complex protein NUP58
KO
K14307
nucleoporin p58/p45
Organism
nta
Nicotiana tabacum (common tobacco)
Pathway
nta03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
nta00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
107765235
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nta03019
]
107765235
Messenger RNA biogenesis [BR:
nta03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
107765235
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin_FG2
Ku_N
Nucleoporin_FG
EssA
Motif
Other DBs
NCBI-GeneID:
107765235
NCBI-ProteinID:
XP_016439346
UniProt:
A0A1S3XHE1
LinkDB
All DBs
Position
17:73128901..73135430
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AA seq
552 aa
AA seq
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MAFSFTPQAQQPSPFQTPGQQQPSPFQIAGQQQSTPFQTPGQQQSSPFQTPGQQQSSPFQ
IPGQQQSSPFQTPGQQQSSPFSQITPFSQQPQQQQQLQFQQQQQQQQQQLQLQLQQQQQL
QQQQQSQQQQQQLYLFTNDKTPATYSTKWADLHPDSQKLLLQIEERILEYRDESQRLDQC
SRLYDSSVANDGFELDASRSIQELGGVSTSMERQTAILQELMVVVKDMLRNTEVAVRSFM
MLCPRFLRQSAPAAASSTAPSQASGATVAQTASTQAQSTPNAPVFDFYRGIPKKPSPFLQ
QTVARFEKYLLECRQWVEELEQLMLLDSDRNSMNSSSSLLQSLPKVMSNVHDFFVHVAAK
VESIHQYIESMKTAYLADQRRRGDGSDPFLEADRRETAKLEAAARRVHPTLHLPAISQPS
TQVAGLISSSAAPGASSAPQTSSAVPSALPGSGSSLFATPSVAASSSSLFTTPTMSAPVS
SLFGTSGASPQNSLFGSLSTSSPPSSAPLFGSTPASGVSGFATPFGSGAALGSGASFGTV
SKSRAKSRTGRR
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
atggcgttctctttcactccacaggcacaacagccgtcgccattccaaactccaggccag
caacagccgtcgccattccaaattgccggccagcaacaatcgacgcctttccaaactccc
ggccagcaacagtcgtcgccattccaaacacccggccagcaacagtcgtcgccattccaa
attcccggccagcaacagtcgtcgccattccaaactcctggccagcaacagtcgtcgcca
ttctcgcagatcactcccttttcgcagcagccgcaacaacaacagcaacttcaatttcaa
cagcagcagcaacaacaacaacaacaactgcaactgcaattgcagcagcaacaacaactg
cagcagcaacagcagtcgcagcaacagcagcagcagttgtaccttttcaccaacgataag
acgccagccacttacagtaccaaatgggcagacctccacccggattcacagaagctgctg
ttgcaaattgaggagagaatactggaatacagggatgaaagtcaaaggcttgaccaatgt
agccgactttatgattcatcagtggccaatgatggctttgagttggatgctagtcgcagc
attcaggaacttggtggagttagtacatcaatggaaaggcaaacagctatcttgcaagag
ctaatggttgttgttaaagatatgctgcgcaatacagaggttgctgtgcgttcctttatg
atgttatgcccaaggtttcttcgtcaaagtgcacctgctgctgcaagttctactgctcca
tcacaggcatcaggtgcaacagtcgctcaaacagcatccactcaagcacagtctactccc
aatgcaccagtttttgatttttacagggggataccaaagaaaccctctccgtttttgcag
caaacagtcgcaagatttgagaaatatcttttagaatgccggcaatgggttgaagaattg
gagcagctgatgctcttagattctgacaggaattccatgaactccagttcatctttgttg
cagtctcttccaaaagtcatgtcaaatgtgcatgacttttttgttcatgttgcagcaaag
gtagagagcattcatcagtacattgaatcaatgaaaacggcatacctggctgatcagcgc
cgtcgaggggatgggagcgatccttttcttgaggcggataggcgggaaacagctaaactg
gaggcagctgctagaagggtacatccaactttgcatttacccgcaatttcacaaccatca
actcaagtagcaggattgatttccagctcagcagcacctggggcatccagtgcaccacaa
acatcatctgcagttccttctgccttacctggaagtggatcctcactctttgctactcca
tctgttgctgcttcatcttcttccctgttcactactccaacaatgtcagctccagtctcc
tctttgttcggaacatctggtgcttcccctcaaaattcactctttgggtccttgtctact
tccagtccaccctctagtgctccattatttggttctacccccgcttctggagtttcaggt
tttgcaacaccttttggttcaggtgctgcactaggatcaggggcaagctttgggactgta
tctaagtctagagcaaaaagtcgtacaggcagacgttag
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