Nicotiana tabacum (common tobacco): 107765912
Help
Entry
107765912 CDS
T04643
Name
(RefSeq) WD-40 repeat-containing protein MSI2-like
KO
K10752
histone-binding protein RBBP4
Organism
nta
Nicotiana tabacum (common tobacco)
Pathway
nta03082
ATP-dependent chromatin remodeling
nta03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
nta00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
107765912
03083 Polycomb repressive complex
107765912
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
nta03036
]
107765912
Chromosome and associated proteins [BR:
nta03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
107765912
Histone modification proteins
HAT complexes
HATB complex
107765912
HDAC complexes
Sin3A-HDAC complex
107765912
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
107765912
PRC2.2
107765912
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
107765912
Heterochromatin formation proteins
Other heterochromatin formation proteins
107765912
Chromatin remodeling factors
NuRD complex
107765912
NuRF complex
107765912
NuRF complex (fruit fly)
107765912
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CAF1C_H4-bd
WD40
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
Beta-prop_EIPR1
Beta-prop_EML_2
WDR55
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_WDR19_1st
WD40_MABP1-WDR62_2nd
Beta-prop_EML
WD_LRWD1
Beta-prop_WDR90_POC16_2nd
MIOS_WD40
Beta-prop_HPS5
WD40_RFWD3
Beta-prop_WDR35_TULP_N
Beta-prop_NUP159_NUP214
WD40_MABP1-WDR62_1st
DUF6922
Motif
Other DBs
NCBI-GeneID:
107765912
NCBI-ProteinID:
XP_016440099
UniProt:
A0A1S3XJS5
LinkDB
All DBs
Position
Un
AA seq
403 aa
AA seq
DB search
MTEAEMEAAGGTEEEVEEEFSVWKKNTPLLYDLVICHALEWPSLTVQWLPSAAVDSGSFL
THKLILGTHTSDDFPNYLMVANVHLPRNPASGLEHNLSNPQIPKVEIVQKIHVDGEVNRG
RCMPQKPAVVAAKTSSAEVYVFDSGKQPLDHERGSCDPDVRLRGHDKEGYGLSWSPFKEG
YLLSGSDDRKICLWDVSAMPQHKVLLAHHTYEEHADVVDDVSWHPKNENLYGSVGDDCRL
IIWDLRTNKSQHSVVVHEKEVNYLSFNSYNEWVLATASSDSTVGLFDMRKLSTPLHVFGS
HTDEVFQVEWDPNHETVLASSAGDRRLMVWDLNRIGDEQLEGEAEDGPSELLFSHGGHKA
KISDFSWNKNEPWVITSVAEDNTIQVWQMAESIYHDDDDNGDC
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
atgacagaagcagaaatggaggcggcgggaggaacggaagaagaagtggaagaggaattc
tccgtttggaagaagaacacgccgttactttacgaccttgtcatctgtcatgcccttgaa
tggccttctctcaccgttcaatggcttccgtcagctgccgtcgacagcggttccttttta
acgcacaagctcattctagggacccacacttccgatgatttccccaattatctcatggtc
gctaacgtccatcttccccgtaatcctgcttcaggactcgaacacaatctcagtaaccct
caaatccctaaggtagagatagtacaaaagatacatgttgatggagaagtgaataggggt
agatgtatgccacaaaagccagctgtagttgcggcaaagaccagtagcgctgaagtttat
gtctttgacagtggtaaacagccactcgatcatgaaaggggatcttgcgatcctgatgtt
agacttagagggcatgataaagaaggttatggcttatcgtggagcccatttaaagagggt
tatcttttgagtggttcggatgatcgaaagatttgtttgtgggatgtttctgcaatgcct
caacataaagtgcttctggcccatcatacatatgaggaacatgcagatgtagttgatgat
gtgtcgtggcatccaaagaatgagaacctatatggttctgttggagatgattgtcgtctg
atcatttgggacttgaggacaaacaaatctcaacactctgttgtagtgcacgagaaagag
gtgaattatttatccttcaactcgtataatgagtgggttcttgctacagcatcatcagat
agtactgtcggtctgttcgacatgcgaaagctgagcactccattgcacgtgtttggtagt
cacacggatgaggtatttcaggtagaatgggatcctaatcatgagaccgtactggcatct
tcagctggtgatagaaggttgatggtctgggatcttaacaggattggtgacgagcaattg
gaaggggaagctgaagatgggccctctgaacttctcttctctcatggtggtcacaaagca
aagatttctgacttttcatggaacaagaacgagccatgggtcattacaagtgttgcagaa
gacaatactatccaagtgtggcagatggctgagagcatctaccatgatgacgatgacaat
ggcgactgctga
DBGET
integrated database retrieval system
