Nicotiana tabacum (common tobacco): 107766276
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Entry
107766276 CDS
T04643
Name
(RefSeq) protein SMG7-like
KO
K14409
protein SMG7
Organism
nta
Nicotiana tabacum (common tobacco)
Pathway
nta03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
nta00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
107766276
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nta03019
]
107766276
Messenger RNA biogenesis [BR:
nta03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
107766276
mRNA cycle factors
Common to processing body (P body) and stress granule
107766276
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EST1_DNA_bind
EST1
Motif
Other DBs
NCBI-GeneID:
107766276
NCBI-ProteinID:
XP_016440514
UniProt:
A0A1S3XL08
LinkDB
All DBs
Position
Un
AA seq
973 aa
AA seq
DB search
MMAIPMDNSLDHSSRECVQRLFNKNAELENKRRKAAQARVSSDPNAWQQMRENYEAIILE
DHAFSEQHEIEYALWQLHYRRIEELRARFNAALASNGSTTSQNGKGPPRSGPDNITKIRT
QLKTFLSEATGFYHDLMVKIRAKYGLPLGGFSDDPENQISSFNDGKKPMELKKGLISCHR
CLIYLGDLARYKGLYGEGESKARDFAAASSYYLQASSLWPSSGNPHHQLAILASYSSDEL
VAIYRYFRSLAVENPFTTARDNLIIAFEKNRQCYSQLPRDAKALFIKAEPSRTTGKGRGK
CETRKPLKDVKVEASLPKEKASSISEIFKTFRMGFVRLNGILFTRTSLETFEEVLSSVKA
DLLELLSSGSDEKYNFGFDAADCRLAIVRLVAILIFTIHNVIRESDNQSYSEILQRSVLL
QNAFTAAFEFMGHVVERCIQLNDPSSSFLLPGVLVFVEWLACHQDIAFGNESEEKQARAR
SFFWKNCITFFNKLLATGSKFVDEDEDETCFSNMSRYDEGESGNRLALPEDFELRGFVPL
LPAQLILDFSRKHSFGSDSGSKEKKARLQRMIAAGKALANVVRVGEEGIYFDTRGKKFVI
GLEPQTSDDYQLNGSREVAKLSGIELESPDAGLMNVGDLQPKQQLYVECEEEDEVIVFKP
SVMEKVNGISSNTMTLAVPVSVISAASVPSGVSMASVNICREMGPFSSALDGLSLQNAWS
ANVRQPTSIAHTNAQYVQPIQTSASMWSVEQDAVMNGLVGGLNLMGNGRTTEAELQNHPE
MVPPAAYSVPLPRSVNFSTANNIHVQVPEAVIPSIFSSLTSSLAGSDSMSMKSSSVVSTG
IKKNPVSRPVRHLGPPPGFGSAASKVDDSSSALTLKNENNPIYRMDDYSWLNGYQLPSTH
QSIGYNNSHNHSTQTYHSVSNSGSLVGMVSFPFPGKQVPSVHMQSDIQKANQQSVALPQQ
YRGQSLWQDRYLV
NT seq
2922 nt
NT seq
+upstream
nt +downstream
nt
atgatggccattccaatggataacagtttagatcattcgtcgcgggaatgcgttcagcgc
ctcttcaataagaatgcggagttggagaataagcgtagaaaagcagcacaagcaagagtt
tcttctgacccgaacgcatggcaacaaatgcgggaaaactatgaagctatcatccttgag
gatcatgctttttctgaacagcatgaaatagaatatgccttgtggcagttacattataga
agaattgaggaactccgtgcacgcttcaatgctgcactagcttcaaatggatcaaccact
tctcagaatgggaaaggtccacctcgcagtgggccagataacatcacaaagattcgcacg
cagttaaagacttttctctcagaagcaactggattttatcatgatttgatggtgaaaatc
agggcaaagtatggcctgccactaggaggtttctctgatgatccagagaatcagatttct
tcttttaatgatggcaaaaaacctatggagttgaagaaaggcttgatatcctgccatcgt
tgtttgatttatctgggtgatcttgctcggtacaaaggcttatatggtgagggtgaatct
aaagctcgcgactttgcagcagcatcaagttattacctgcaagcttcttcactttggcct
tcaagtggcaatcctcatcatcagcttgcaatactggcttcctattccagtgatgagttg
gtggcaatctataggtattttcgtagtcttgcagtagagaatccttttaccactgcaagg
gacaacttaatcattgcgtttgagaagaatcgtcagtgttactcccagctgccaagggat
gctaaggctttgttcatcaaggcagaaccttcacgtacaactggaaaaggacgaggtaaa
tgtgaaacaaggaagcctctgaaagatgtaaaggttgaagcaagtttacccaaggaaaaa
gcttcaagtatatctgaaatcttcaaaaccttcaggatgggattcgttcggttgaatggt
atcctcttcacacgcactagcttggagacgtttgaagaagtgctgtcatcggttaaagct
gatctgcttgagcttctctcttctgggtctgatgagaagtataattttggtttcgatgct
gcagactgtagactggcaattgtcaggctcgtcgctatcttaatattcaccatccataat
gtgataagggaaagtgataatcaatcatattctgagattctacagagatcagttcttcta
cagaatgcatttactgctgcttttgagttcatgggtcatgtggttgagagatgtatccaa
ttaaatgatccctcatctagcttcttattgcctggtgttttggttttcgtagaatggttg
gcatgccatcaagatattgcatttggtaatgaatcagaggaaaaacaagcaagggctaga
tcttttttctggaagaactgcatcactttttttaataagctcttggcgactgggtctaag
tttgtcgatgaagatgaagatgaaacatgtttttccaatatgagcaggtatgatgaaggt
gagagtggtaatcgtcttgcgttgccggaagactttgaacttagaggatttgttcctctt
cttccagctcagcttatccttgacttctcaaggaaacattcttttggtagtgatagtgga
agtaaagagaagaaggcacgtcttcagaggatgatagcagctggaaaggctcttgctaat
gtggtccgggttggagaagagggaatatattttgacaccaggggaaagaaatttgtcatt
ggccttgagccccaaacttctgatgattatcaacttaatggctccagggaagttgctaaa
ttaagtggtattgaactggaaagtccagatgctggactgatgaatgtcggagatctgcag
ccaaagcagcaattgtatgtggaatgtgaggaagaagacgaagttatcgtttttaagccg
tcagtgatggaaaaagtgaatggcatctcttcaaatacaatgaccttagcagttcctgtg
tctgttattagcgctgccagtgttccttctggtgttagcatggcttctgttaatatctgt
agggagatggggccattttcatctgcacttgatggattgagcttgcagaatgcttggagt
gcaaatgtaaggcagccaacaagcattgctcataccaatgcccaatatgtgcagccaatc
caaacaagtgcttccatgtggtctgtagagcaagatgctgttatgaatggattggtgggg
ggccttaacttgatgggaaatggacgaaccacagaagctgagttgcaaaatcatccagaa
atggttccacctgcagcatattcagtccctttaccccggtctgtgaattttagcactgca
aataatattcatgtccaggttccagaggctgttataccatctatcttcagttcacttaca
tcctcactagctggttcagatagcatgtcaatgaaatcttcatcagttgtctcgacagga
attaagaaaaatccagtgagccgacctgttaggcatctgggtccacctccagggtttggt
tctgctgcttcgaaagtagatgactcatcatctgctttgaccttaaagaatgaaaacaat
cccatctatcgtatggatgattatagctggttgaacggatatcagttaccttcaacacat
cagagcattggttacaataactctcacaatcattcaacacaaacataccactctgtgagc
aacagtggtagcttagtcgggatggttagcttccctttccctgggaaacaggtgccctct
gtgcacatgcagtcagatattcagaaagcaaatcaacaatctgttgcactgcctcagcag
tatcgaggacagtccctgtggcaagatcgttaccttgtgtga
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