Nicotiana tabacum (common tobacco): 107766367
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Entry
107766367 CDS
T04643
Name
(RefSeq) regulator of nonsense transcripts UPF2-like
KO
K14327
regulator of nonsense transcripts 2
Organism
nta
Nicotiana tabacum (common tobacco)
Pathway
nta03013
Nucleocytoplasmic transport
nta03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
nta00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
107766367
03015 mRNA surveillance pathway
107766367
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nta03019
]
107766367
Messenger RNA biogenesis [BR:
nta03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
107766367
mRNA cycle factors
P-body specific factors
107766367
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MIF4G
Upf2
Motif
Other DBs
NCBI-GeneID:
107766367
NCBI-ProteinID:
XP_016440625
UniProt:
A0A1S3XKW0
LinkDB
All DBs
Position
Un
AA seq
1193 aa
AA seq
DB search
MEHPEDERRVGVEHPEKHEDEEAVARHEDYKKSVEAKMALRQINLNPERPDTGFLRTLDS
SIKRNTAVIKKLKQINEEQREGLMEELRGVNLSKFVSEAVTAICDAKLRSTDIQAAVQIC
SLLHQRYKDFSPSLVQGLVKVFFPGKATEDVDADKNARAMKKRSTLKLLLELYFVGVVDD
TGIFVNIVKDLTNVEHLKDRDATQTNLSLLASFARQGRYLLGLPLSGQDILEEFFKALNV
TTDQKRFFRKAFQTYYDAAIELLQSEHASLRQMEHENAKTLSAKGELNEENASAYEKQRK
AYDQLYRGISGLAEALDMQPPVMPEDGHTTRVTSGDDASSPGASKDSSVLEALWDDEDTR
AFYECLPDLRAFVPAVLLGEAEPKSSEQPLKAQEHSIDSASEADEAQTAAVETAEGAVDA
GAVQEDRNDKGRDEKDKEKTKDKDEKDKETDKEKAKEKEAERKGEGDKEKARGVEGANLD
GLLQRLPSCVSRDLIDQLTVEFCYLNSKSNRKKLVRALFNVPRTSLELLPYYSRMVATLS
TCMKDVSSMLLQLLEEEFSFLINKKDQMNIETKIRNIRFIGELCKFRMAPPGLVFSCLKA
CLDEFSHHNIDVACNLLETCGRFLYRSPETAIRMANMLEILMRLKNVKNLDPRHITLVEN
AYYLCKPPERSARVSKVRPPLHQYIRKLLFSDLDKSSIEHVLRQLRKLPWSECEAYLLKC
FMKVHRGKYGQIHLIASLTAGLSCYHDDFAVAVVDEVLEEIRVGLELNDFGMQQRRIAHM
RFLGELYNYKLVDSSVIFDTLYLILVFGHETSEQDVLDPPEDCFRIRMVITLLETCGHYF
DRGSSKRKLDRFLIHFQRYILNKGVLPLDIEFDLQDLFAELRPNMTRYASIEEVNAALVD
LEEHERIVNVEKANTEKHSDSEKIPSRTTSGMSVNGKSLANGIEENGLHEEIMETESDSE
NGTIEHAGHDDDEETDDGNRDERGDTEDESDDGDGRGSDEDEVHVRSKVVGADPLEEAEF
ERELRALMQESLDSRKLELRGRPTLNMMIPMNVFEGPSKDHRGVEGESGDETLDEGAGGS
KEVPVKVLVKRGSKQQTKKMLIPRDCSLIQSTKQKEAAELEEKQDIKRLVLEYNDREEEE
LNGLGNQPPSWTQNSGSRVAHRGNAWDAPGRGSGSRHRYLYHSGGGLYYGRRR
NT seq
3582 nt
NT seq
+upstream
nt +downstream
nt
atggaacatcctgaggatgaacgtcgtgttggagtggaacacccggagaaacatgaagat
gaggaagcggtggctcgtcacgaggattacaaaaaatctgttgaggcaaagatggctctt
aggcagattaatttgaatccagaaaggccagacactggttttctcaggacgttggattct
agtattaagcgcaatactgcagttattaaaaagctaaaacagattaatgaagagcagcga
gaaggtttgatggaagagttgcgcggtgtcaacttaagcaagtttgtaagtgaagcagtg
actgctatatgtgatgcaaagcttcggtccacagacatacaagctgcagtgcagatctgt
tctctgcttcatcagcggtacaaggacttttcaccaagtcttgttcaaggccttgtgaaa
gttttctttcctggaaaagctacagaggatgtagatgcggacaagaatgcgagggctatg
aaaaagcgtagcactttaaaacttcttttggaactttactttgttggagttgttgacgat
actggcatctttgtgaatattgttaaggacctcaccaatgttgaacatctgaaggatcgt
gatgcaactcagactaatttgtcactccttgctagctttgctcggcaaggaagatacctg
cttgggcttccattgtctggccaagatattcttgaagagtttttcaaggcccttaatgtg
acaactgatcagaaaaggttctttaggaaggcgttccaaacatattatgacgcagccata
gaacttcttcagtcagagcatgcttcacttcggcaaatggagcatgaaaatgcaaagact
ttatctgccaaaggtgaactgaatgaggagaatgcttctgcatatgaaaagcagcggaaa
gcttatgaccagctgtatcgtggcatctcaggattggcagaagcacttgacatgcaacct
ccggtgatgcctgaggatggtcatacaaccagggtaacatcaggggacgatgcatcatcc
cctggtgccagtaaagattcttctgtccttgaagccctgtgggatgatgaagatacaagg
gctttctatgagtgtctaccagatctcagagcatttgttccagctgtattgcttggagaa
gcagaaccaaagtcgagtgaacagcctctgaaggcgcaagagcattcgattgattcagca
agtgaagcagatgaagctcagactgctgcagtagagactgcagagggtgctgtagatgct
ggagctgtgcaggaggacagaaatgataaaggcagggatgagaaggataaagagaagacc
aaggataaagatgaaaaggataaagagactgataaggaaaaagcaaaagaaaaggaagct
gaaagaaaaggagaaggtgacaaggagaaagcaagaggtgtcgaaggagctaatctagat
ggtctgcttcagcggctacccagttgtgttagccgtgatttgattgaccagttgacagtg
gagttttgctatctgaattccaagtccaataggaaaaagcttgttagagcattgttcaat
gtccccaggacatcactagagttgttgccatactactcacgcatggtggccactctgtca
acttgcatgaaggacgtgtcttccatgcttttacagttgttggaagaggagttcagcttt
ctgataaataaaaaggatcaaatgaatatagaaacaaaaataaggaatattcgttttatt
ggagagctctgcaaatttagaatggcaccacctggccttgtcttcagttgtctaaaggct
tgtttggatgaattcagtcatcacaatattgatgttgcttgcaatcttctcgagacatgt
gggcgttttctttaccgatctcctgaaactgcaatacgcatggcaaacatgttagagata
ttaatgcgtctgaagaatgttaaaaatttggatcctcgccacattaccttagtggagaat
gcatattacttatgcaagccaccggaaagatctgctcgagtgtctaaagttcggcctcct
ttgcatcagtacataagaaaattgctcttttcggatcttgacaaatcttcaatagagcat
gtgctcagacagcttcgtaagcttccttggagtgaatgcgaggcatacctcttgaagtgt
ttcatgaaggttcacaggggaaagtatggtcagattcatttgattgcatcacttactgct
ggtttaagttgctatcatgatgattttgctgttgctgttgttgatgaggttctggaggag
atcagggtgggattagagttgaatgacttcgggatgcagcaaagacgtattgctcacatg
cgtttcctaggggaattatataactataaacttgttgattcctctgttatatttgacacg
ctctatttgattctcgtttttggccatgaaacatctgagcaagatgtgctggatcctccc
gaggattgtttccgtatcaggatggttattacactacttgaaacctgtgggcactacttt
gatcgaggttcatcaaagcgaaaacttgatcgcttcctaatacatttccagaggtacata
ttgaacaaaggtgtactccccctggatatagagtttgatttgcaggacttatttgccgaa
ttacgtcctaacatgacgagatatgcatcaattgaagaagtcaatgctgctttagttgac
cttgaggagcatgagcgcatagttaatgtggaaaaagccaacactgagaagcactctgac
agcgagaaaattcccagcaggacaacctctggaatgtctgtaaatgggaaaagccttgcg
aatggcattgaagaaaatggattgcatgaagagatcatggagactgaaagtgattccgag
aatggcaccattgagcatgcgggtcacgatgatgatgaagagacagatgatgggaatcgg
gatgagaggggtgacactgaggatgaatctgatgatggtgatggacgtggttctgatgag
gatgaagtacatgtcaggtcaaaggttgtgggggctgatcctctggaggaggcagaattt
gagagagagcttcgggctctgatgcaggaaagtttggattcaagaaaattggaattacgg
ggaaggcctacactaaacatgatgataccaatgaatgtctttgaggggccatccaaggac
catcgcggggttgaaggagagagtggtgatgaaacgttggatgaaggggctggaggaagt
aaggaggttccagtgaaggttcttgtgaagcgaggtagtaagcagcagacaaagaaaatg
ctcattcctcgtgattgctcactcattcagagcacaaaacagaaagaagcagctgagctt
gaagaaaagcaagacatcaagaggctggttctggagtacaatgatagagaggaagaagag
cttaatgggttagggaatcagccaccaagctggacacaaaacagtgggagcagagttgct
cataggggcaacgcatgggatgcacctggcaggggcagtgggtcacgtcatcgctatctg
tatcattcaggtggcgggctttattatggcagaagaagatga
DBGET
integrated database retrieval system
