Nicotiana tabacum (common tobacco): 107767268
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Entry
107767268 CDS
T04643
Name
(RefSeq) pectate lyase-like
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
nta
Nicotiana tabacum (common tobacco)
Pathway
nta00040
Pentose and glucuronate interconversions
nta01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
nta00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
107767268
Enzymes [BR:
nta01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
107767268
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Paralog
GFIT
Motif
Pfam:
Pectate_lyase_4
Pec_lyase_N
Beta_helix
NosD
Motif
Other DBs
NCBI-GeneID:
107767268
NCBI-ProteinID:
XP_016441675
UniProt:
A0A1S3XNX8
LinkDB
All DBs
Position
Un
AA seq
439 aa
AA seq
DB search
MAFVSGNSVLLILVISLASLVPNLHAGIAEFDAYLEKQAKEALNSSLAAYNEHPEEITDT
FNREVGDTLLNITSLRRHLKEKSSCMATNPIDRCWRCDENWAKNRKKLAECARGFGHKTT
GGKAGRYYVVTDDSDDDVKDPKPGTLRHAVIQEEPLWIIFEKSMVIKLKEELMITSDKTI
DGRGVSIYIAYGAGLTIQFVHNVIIHNIRIHHIISTSGGMIRDSVKHIGIRTLSDGDGIS
IFGSNHIWIDHCTLSQCTDGLIDAIMASTAITISNCKFNHHNDVMLLGATDAFPQDSIMQ
VTVAFNRFGKGLIQRMPRCRWGFFHVVNNDYSHWQMYAIGGSANPTIISQGNRFKAANNP
NTKQVTKRDYAPESVWKNWQWVSEGDLFLNGAYFVESGPQNKKNSALTKPHRIKFKPGSY
AGRLTRYAGVRKCKIGTPC
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atggcctttgttagtgggaattcagttttgttaatattggtcatatcgttagcttcatta
gtcccaaatttgcatgccggaattgctgaatttgatgcatatttggaaaagcaagctaag
gaagcgctcaactcttcccttgctgcatacaatgaacatcctgaagaaatcactgataca
ttcaatagagaagtcggagacacattgttgaatattacaagcttaaggaggcatctaaag
gaaaaaagtagttgcatggcaaccaatccaattgacagatgctggaggtgtgacgaaaac
tgggcgaaaaacaggaaaaagctagcagaatgcgctcggggattcggccacaaaacgact
ggtggtaaagcaggaaggtactatgttgtaaccgatgactcggatgatgacgtgaaggat
ccaaagccggggacccttcgtcatgctgtgatccaagaggagccattgtggattatcttt
gagaagtcaatggtaattaagttgaaggaagaactgatgattacaagtgacaagacgatc
gatggcaggggagtttctatttacattgcctatggcgctggtttaactatccaatttgtg
cataatgtcataatccacaacattaggattcatcatattatatctacctcaggtggaatg
ataagagattctgttaagcatattggtattaggacactgagtgatggagatggtatttct
atttttggttcaaaccatatttggattgaccactgcactttgtcccaatgtactgatggc
ctaattgatgccatcatggcttccactgcaatcaccatttctaactgcaaattcaatcat
cataacgacgtgatgcttttgggggcaactgatgccttccctcaagattcaataatgcaa
gtcacagttgcattcaatcggttcggaaagggattgattcagaggatgccaaggtgcagg
tggggattcttccatgttgtcaacaatgattactctcactggcaaatgtatgcaattggt
ggcagcgctaatccaaccattatcagccagggtaatcgtttcaaggccgccaacaaccct
aacactaagcaggtgactaagagggattatgcaccagaatctgtgtggaagaactggcaa
tgggtatcagagggtgatttgttcttaaatggggcttactttgtggagtcagggccacaa
aacaagaaaaattctgcattgactaaacctcataggatcaagttcaagcctggttcatat
gcaggccgactcactcgctatgctggtgtgcgcaaatgcaaaatcggcacaccttgttaa
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