Nicotiana tabacum (common tobacco): 107767374
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Entry
107767374 CDS
T04643
Name
(RefSeq) DNA-binding protein SMUBP-2-like
KO
K19036
ATP-dependent RNA/DNA helicase IGHMBP2 [EC:
5.6.2.5
5.6.2.3
]
Organism
nta
Nicotiana tabacum (common tobacco)
Brite
KEGG Orthology (KO) [BR:
nta00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
nta03009
]
107767374
03012 Translation factors [BR:
nta03012
]
107767374
Enzymes [BR:
nta01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
107767374
5.6.2.5 RNA 5'-3' helicase
107767374
Ribosome biogenesis [BR:
nta03009
]
Eukaryotic type
Other ribosome biogenesis factors
107767374
Translation factors [BR:
nta03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
107767374
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_11
AAA_12
SMUBP-2_HCS1_1B
AAA_19
Viral_helicase1
AAA_30
AAA_22
nSTAND3
AAA_16
AAA_25
DEAD
AAA
ResIII
ABC_tran
ATPase
UvrD_C_2
UvrD-helicase
AAA_33
PIF1
PhoH
RuvB_N
AAA_7
NPHP3_N
IstB_IS21
Zot
TsaE
Sigma54_activat
SRP54
NB-ARC
NTPase_1
DUF2786
AAA_24
ATPase_2
AAA_5
cobW
Rad17
AAA_18
AAA_28
Motif
Other DBs
NCBI-GeneID:
107767374
NCBI-ProteinID:
XP_016441854
UniProt:
A0A1S3XPQ9
LinkDB
All DBs
Position
Un
AA seq
597 aa
AA seq
DB search
MEKGKSNTKKNKSSSSTAMTLDQFVSTMAPLLDLEKEAEISLSMSSAETRSLDSAQKKGS
TILNLKCADIQTGLMGKTLMELQSTKGDILPPHKFGTHDVVVLKPNKADLGSPALGQGVV
YRLKDSSITVAFDDVPEEGLNNPLRLEKLANEKDAISKALSSKNVILLHGPPGTGKTTTV
VEIILQEAKRGSKILACAASNIAVDNIVERLVPHRVKLVRLGHPARMLPQVLDSALDAQV
LRGDNSALANDIRKEMKTLNGKLLKAKDRNAKRDIRRELKALSKEERKRQQLAVTDVLKN
ADVVLTTLTGALSKKLDGMSYDLVIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTI
QSVEAEKKGLGKTLFERLADLYGDEITSMLTVQYRMHELIMNWSSGELYDNKIEAHSSVA
SHMLYHLEDVKKTPSTESTLLLIDIAGCDMEDKKDEEDSTLNEGEAEVAIAHAKRLVESG
VRASDIGLITPYAAQVVFLKKLKSNEDKLKEMEISTVDGFQGREKEAIIISMVRSNSKKE
VGFLSDRRRMNVAVTRARRQCCLVCDTETVSGDKFLKRLIEYFEEHGEYLSASEYGN
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
atggagaaagggaaaagcaacaccaagaagaacaagtcatcatcttcaactgccatgact
ctcgaccaattcgtttccactatggcccctttactagatttggaaaaggaagctgaaata
tcactttccatgagctcagctgagacgaggagtttggattctgctcagaagaagggctcc
actattcttaatttgaagtgtgctgatatccagacagggctaatgggcaagacactgatg
gagcttcaatcaaccaaaggggatattcttccgcctcacaagtttggcactcatgacgtt
gttgttctgaaaccaaacaaagctgatttaggctcccctgcacttggacagggggttgtc
tacaggctaaaggactcatctattactgttgcttttgatgatgtcccggaagagggtctg
aataatcctttacgccttgagaagttggcaaatgagaaagatgccatctcaaaggcgctt
tcatccaagaacgtaattttgctgcatgggcctcctggaactgggaagacaactactgtt
gttgagattattttgcaggaagcgaaacgtggttcaaagatccttgcttgtgctgcttca
aatattgctgttgataacattgttgagagacttgttccacacagagtgaagttggtgaga
ttgggacatccggcacgtatgctcccacaagtactggatagcgctcttgatgcccaggtc
ctacgtggtgataatagtgctcttgcaaatgacatccgcaaggagatgaagacattgaat
ggaaagttattaaaagctaaagatagaaatgcaaagagagatatcaggagggagctcaag
gctctttcaaaagaagagcgtaaaaggcagcagctagcagtaacagatgttcttaagaat
gcagatgtagtcctgacaacattgactggggcattgtccaagaagttggacggcatgtca
tatgatttggttattattgatgaagctgctcaggcattggaaatagcatgctggattgct
ttattgaagggatcaaggtgtatattggctggagatcatctccagcttcctccaaccatt
caaagtgtagaagctgagaagaaaggactgggaaagacgctttttgaacgtttagcagat
ttatatggagatgaaatcacgtctatgctcactgttcagtaccgcatgcatgaactgatt
atgaactggtcatccggagagctgtatgataataagattgaagcccattcaagtgttgct
agccatatgttatatcaccttgaggatgtgaagaaaacaccttccactgaatcaaccctt
ctgctcatagacatagctgggtgtgacatggaagacaaaaaggatgaggaagatagcaca
ttgaatgaaggtgaagctgaggttgccattgcccatgcaaagagactagtcgaaagcgga
gtccgagcttctgatattggattaatcactccttatgcagcacaggttgttttcttgaaa
aagctcaaaagcaatgaagacaaattaaaagaaatggagatctcaactgttgatggtttc
cagggtcgagaaaaagaagccattatcatttctatggtccgatcaaactcaaagaaagag
gtgggatttcttagtgacagaaggagaatgaatgttgctgttacacgagcaaggagacag
tgctgtcttgtatgtgatactgagacagtcagtggtgataaattcttgaagaggttgatt
gagtactttgaggagcatggtgaatatttgagtgcttcggagtatggaaattaa
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