Nicotiana tabacum (common tobacco): 107767649
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Entry
107767649 CDS
T04643
Name
(RefSeq) uncharacterized protein LOC107767649
KO
K14791
periodic tryptophan protein 1
Organism
nta
Nicotiana tabacum (common tobacco)
Brite
KEGG Orthology (KO) [BR:
nta00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
nta03009
]
107767649
Ribosome biogenesis [BR:
nta03009
]
Eukaryotic type
90S particles
Other 90S particles
107767649
Pre-60S particles
Other pre-60S particles
107767649
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
WD40_CDC20-Fz
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40
Beta-prop_RIG_2nd
WD40_Prp19
Beta-prop_EIPR1
WD40_RFWD3
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
Beta-prop_WDR36-Utp21_1st
WDR55
Beta-prop_Aladin
WD40_Gbeta
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR3_2nd
WD_LRWD1
EIF3I
ANAPC4_WD40
Beta-prop_SCAP
WD40_MABP1-WDR62_1st
Beta-prop_EML
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
Beta-prop_IFT140_1st
Beta-prop_WDR19_1st
Beta-prop_DCAF12
MIOS_WD40
Beta-prop_WDR41
Beta-prop_WDR36-Utp21_2nd
Beta-prop_HPS5
Beta-prop_VPS8
Beta-prop_WDR75_2nd
Beta-prop_WDR35_TULP_N
Beta-prop_SPT8
Beta-prop_Nup120_160
MTPAP-like_central
TMEM215
Motif
Other DBs
NCBI-GeneID:
107767649
NCBI-ProteinID:
XP_075113028
LinkDB
All DBs
Position
7:complement(9209694..9221358)
Genome browser
AA seq
494 aa
AA seq
DB search
MIAAISWVPKGVAKAVPAAAEPPSKEEIEELLKSGLLDKSEDSDNEEAQEDMNVDEFKEN
DDDEVAVALAAANALGKATKDVSLGTDDIANGLKELNMEKYDDEEADIELFGSGLKDLYY
PSNDMDPYLKDKDNDSEEDEDMTIKPDDSIIVCASNDDDVSHLEIWILEVLSDGTVNMYV
HHEIIIPAFPLCTAWLDCPIKSGEGKGNFIAVGSMELAIEIWDLDILDEVQPAAVLGGIA
DIKKKGKKKTIKYKKDSHSDSVLGLAWNKEYRNILASASADQSVKVWDVNTSSCTVTMND
HTDKVQAVAWSPFKSSVLLSGSFDHTVCLKDVRCPSHSGFKFPVSADVEGLAWDPHSEDS
FVVSLENGTVTSFDIRLARSDPTSATKPIFTIHAHDKAASSMSFSPLVPNLLATGSTDKM
VKLWDLSNNQPSCIATRNPKAGAVFSVSFSDDCPFFLAIGGSKGKLQLWDVSSEDAVLKR
YGKYVAQKGPLPKS
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atgatagcagctatttcgtgggttcccaaaggggtcgcaaaggcagttccagctgcggct
gagcccccttctaaagaagaaattgaggagcttttgaagagtggtctccttgataaaagt
gaagatagtgataatgaggaagctcaagaagatatgaatgttgatgaattcaaggaaaat
gatgatgatgaagttgctgttgcattagcagctgctaatgcacttggaaaagctacaaaa
gatgtctctctaggaaccgacgacatagcaaatggtttaaaggaattgaacatggaaaag
tacgatgatgaggaggctgacattgagcttttcggttcgggactcaaagacttgtactac
ccaagtaatgacatggacccatatctcaaggataaggataatgactccgaggaggatgag
gacatgacaataaaacctgacgattctattatagtttgtgcaagcaatgatgatgatgtc
agtcatctcgagatctggattttggaagttttatcagatggtactgtaaacatgtatgtt
catcatgagattattattcctgcgtttcctctctgcacagcatggctcgattgccctatt
aaaagtggcgaggggaaagggaacttcatagctgtgggctcaatggaactagcaattgaa
atttgggacctagacatattggatgaggtgcaaccagctgctgtattaggtggaattgct
gacataaagaaaaaggggaagaagaaaaccatcaaatacaaaaaggatagccactccgat
tcagtacttggtctcgcttggaacaaggaatataggaatatacttgcaagtgctagtgct
gatcaatcagtcaaggtttgggatgtgaataccagcagctgtactgtcactatgaacgac
catactgacaaggttcaagcagttgcatggagtccatttaaatcatcggttcttctgagc
gggtcattcgatcatacagtttgcttgaaggatgtgcggtgtccatctcacagtggattt
aaatttccagtttccgctgatgttgaaggcttggcttgggatccacattctgaggattca
tttgtggtcagcttggagaatggtacagttactagttttgatatccgtcttgctaggtct
gatccgacttccgcgacgaagccaattttcactatccatgctcatgataaggcagcgtca
tcgatgtcttttagtcctctagtcccaaatcttcttgcaactggttccacagacaagatg
gttaaactatgggatttgagcaacaatcaaccttcttgtattgccacaaggaatccaaaa
gctggagctgtcttctctgtttccttctcagatgattgccccttttttcttgctattggt
ggttctaaagggaagttgcagctatgggatgtttcttcagaagatgcagtgttgaagaga
tatgggaaatatgttgcgcaaaaaggaccgttgcccaaatcataa
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