Nicotiana tabacum (common tobacco): 107767989
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Entry
107767989 CDS
T04643
Name
(RefSeq) SWI/SNF complex component SNF12 homolog isoform X1
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
nta
Nicotiana tabacum (common tobacco)
Pathway
nta03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
nta00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
107767989
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nta03021
]
107767989
03036 Chromosome and associated proteins [BR:
nta03036
]
107767989
Transcription machinery [BR:
nta03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
107767989
Chromosome and associated proteins [BR:
nta03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
107767989
PBAF complex
107767989
GBAF(ncBAF) complex
107767989
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
Mesothelin
Motif
Other DBs
NCBI-GeneID:
107767989
NCBI-ProteinID:
XP_016442577
UniProt:
A0A1S3XSC1
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Position
4:complement(44784622..44787253)
Genome browser
AA seq
531 aa
AA seq
DB search
MNNNNTVRNVGIGNSGPMQIPQSMPMNHNQPAPHLFSQSHVQRASQFPGHFQMSKPQSQR
SHAQFQGQAQAFSHFITSGVNTNVGVSSPATSTPNTATTGGTRKVLQRPTSRAGGSSGHG
QATASPLKTMELTPAVRRKKRKVSDKCIPDKVAANLPESVLYSQLLELEARVDATLCRKK
IDMLESLKDPPHVQKTLRIYVFNPFANQKPPATPESKTAEPPSWSIKIFGRILGDGPDRP
ASKMEHKSGVSYPKFSSFFKKITVYLDQSLYPDNHVILWDCSRSPVHHDGFEIKRKGDKE
FTAIIRLEMNYMPEKFKLSPALQEVLGIEVETRARVLAALWYYVKTRKLQISDDTSSFTC
DPPLRKVFGEEKLKFSLVSQKINPHLTAPQPIHLEHRIKLSGSSPAGNACYDVLVDVPFT
LQKEMSTFLSNLEKNKEIDACDEVISTAIKKIHEHQRRRAFFLGFSQSPADFINALVASQ
ARDLKLVSGDSGRDAEMERCSEFYNQSWTEDAVIRYLNRKHASGTDHSASK
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atgaataataacaacacagttaggaatgttggtataggaaattcagggccaatgcaaata
cctcaatctatgcccatgaaccataatcaaccagcgccacatctattctctcagtcacac
gtacaacgtgcgtcacagttccctggccattttcaaatgtccaaaccacaatctcaacgt
tctcatgctcaattccaaggccaagctcaggcctttagccatttcatcacttcaggggtt
aacaccaatgttggtgtctcatcccctgctacttccacacctaacacagctacgactggt
ggtactagaaaagtgctccagagaccgacttctcgtgctggtggttcctctggtcatggc
caagcaactgcttcacctttaaagactatggaattaacccctgctgtgcgtagaaaaaag
cgtaaagtttctgataagtgtataccagataaagtggctgcgaatttgcccgagtctgtg
ctttactctcagttgcttgaactcgaggctcgtgtagatgctactctttgtagaaagaag
attgacatgttggaatccctgaaggatcctccgcatgtccaaaagaccctcaggatttat
gtattcaaccctttcgcaaatcagaaaccaccagctactcccgagagcaaaactgctgag
ccaccttcttggtctattaagattttcgggaggatcttgggggatgggccggatcgtcct
gcgtctaaaatggagcataaatctggtgtttcttaccctaagttttcatctttcttcaag
aaaattactgtttacttggatcagagtctatatcctgataaccatgtaatcttgtgggat
tgttctcgatcaccagtgcatcatgatggttttgagattaagagaaaaggggataaggag
tttacagcaatcatcagattggaaatgaattatatgcctgagaaatttaaactttcgcca
gctttgcaagaggttcttggtattgaggttgagactcgagcaagagttttagctgctctc
tggtactatgtaaaaactaggaagctacagatatccgatgacacctcctcattcacatgt
gatccacctctaaggaaagtttttggagaggaaaagttaaaattttccctggtttctcaa
aagattaatccacatctgactgcccctcaacctattcatttggagcacaggattaagcta
tctggaagtagcccagctgggaacgcttgttatgatgtactggttgatgttcccttcaca
ttgcagaaggaaatgtccactttcttatctaatttagagaagaacaaggagatcgatgca
tgtgatgaagttatttctactgctataaagaaaatccatgaacatcaaagaaggcgagct
ttttttcttggatttagtcagtcacctgccgattttattaatgcattagttgcgtctcaa
gccagagatcttaagcttgtttctggagattctggccgtgatgcagaaatggagcggtgt
tctgaattctacaatcagtcttggactgaagatgccgtcatccgctacctgaaccgcaag
catgcttctggtactgaccattctgcaagcaaatag
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