Nicotiana tabacum (common tobacco): 107768815
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Entry
107768815 CDS
T04643
Name
(RefSeq) zinc finger CCCH domain-containing protein 41-like
KO
K13192
RNA-binding protein 26
Organism
nta
Nicotiana tabacum (common tobacco)
Brite
KEGG Orthology (KO) [BR:
nta00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
nta01009
]
107768815
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nta03019
]
107768815
03041 Spliceosome [BR:
nta03041
]
107768815
Protein phosphatases and associated proteins [BR:
nta01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
107768815
Messenger RNA biogenesis [BR:
nta03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
107768815
Spliceosome [BR:
nta03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
107768815
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
Nup35_RRM_2
RRM_Nup35
zf_CCCH_4
zf-CCCH
PHM7_cyt
Motif
Other DBs
NCBI-GeneID:
107768815
NCBI-ProteinID:
XP_016443454
UniProt:
A0A1S3XUA0
LinkDB
All DBs
Position
Un
AA seq
752 aa
AA seq
DB search
MGSFSRTPSDSYQMMRLNQSLSGHAGPGRGRGRESGAWGPCESRFSTIDVASQFVPQGPI
NPLLYTGRGPQNVSSGQGAPWNAFGIVPAIPNGGLDTLHTLGLQGTLRTSLNPAMTMGIP
RQRCRDFEERGFCLRGDMCPLEHGVNRIVVEDVQSLSKFNLPVSLPNAHMLGPATVEGSL
PVIGPSGSLVSGKALHNKSINPPVIDNGLGLTDTFGGGSVAGGADFYDPDQPLWSNDHPE
NSVALLDINRSKIDDAGMMLDADSSDQDQVALCDGFKLKRLNRDAGAASRSQSIQGVNRH
GKQTNVDTIDPQMMDSTSEPQSSSGRNMRKPSQKALRTLFVSGIPQKDNKPEALLSHFQK
FGEVIDIYIPMNGERAFVQFSKREEAEAALKAPDAVMGNRFIKLFWANRDRIMDNGASGS
SNFPLAPRGGTPSTVPPHLLVPHKRKDNLQTVARKTAEHGTVAPLATSDLPKPVAQNGLK
TTPPLKKKLETLELLKEEMRKKQEMLEQKRNEFRRKLDKLEKQAVGVKDEAAPDQAMNKP
KGGGTVSNSGKVENSSPVEPSNTVLSPPSEATPDSSRSTENAEPNCSKSSSTVATQGAPF
ILNRYKLDNRPTAFKILPPLPSALANVDVLKEHFSTFGDPPSVELEDLEPQDCNNGSEVQ
NTSAKISFRSRCSAERAFLNGKSWQGQILQLMWVQSSNPAKDVGVGDNVTPASKQPSDAN
GQSNAKIGVADLPEGSVAGNHEPNNQGRREDE
NT seq
2259 nt
NT seq
+upstream
nt +downstream
nt
atgggttctttttccaggacaccttcagattcgtatcagatgatgaggctaaatcagtcc
ctgtctggtcatgctggtcctggtaggggtcgaggaagagaatctggtgcttggggtccg
tgtgaatctaggttcagcactattgatgttgcgtctcaatttgttccacaaggccctatt
aatcctcttctttatactggaagggggccgcaaaatgtttccagtggacagggtgcgcct
tggaatgcgtttggaatagttccagcaatacctaatggtggtcttgatacacttcatacc
cttggtttacagggaacgcttagaacgtccttgaatcctgccatgactatgggcattcca
aggcaaaggtgtagagactttgaggagcgtggtttttgcctaagaggagatatgtgccct
ctggagcatggagtaaatcgcatcgttgttgaagatgttcagagcctttctaagtttaat
cttcctgtgtcacttcctaatgcacacatgctaggaccagctactgtagaaggatcttta
cctgtgataggcccttctggatcattggttagtggcaaagctttacataacaaaagtatc
aaccctccagtgattgacaatggattaggtttgactgatacttttggtggtggttctgtg
gctgggggagctgatttctatgatcctgatcagcctttatggtcaaatgatcatcctgaa
aattcagtagcactcttggatataaatcggtctaaaattgatgatgcggggatgatgttg
gatgcagactcctctgatcaggatcaggttgcgctttgtgatggctttaaacttaagcgt
ctaaatagagatgctggtgcagcttcacgatctcaaagcattcagggtgtaaaccgtcat
ggtaagcaaacaaatgtagataccatagacccgcaaatgatggactcaacttcagagccc
caaagtagttctggacgcaatatgcgaaaaccatctcaaaaggcactccgtactttattt
gtaagtgggattccacagaaagacaacaaaccagaagctcttctttcacattttcaaaaa
ttcggggaggttatcgacatttacatcccgatgaatggtgaacgagcttttgttcaattt
tctaagagggaagaagctgaggctgctttaaaagcaccagatgctgtgatgggcaaccgc
tttataaagcttttctgggcaaacagggatcgcattatggataatggagcaagtggtagt
agtaattttccattagctccccgcggtgggacacccagtacggttccaccccatctattg
gttcctcataaaaggaaagacaatctgcagactgtagcccgaaaaactgctgaacatggt
actgttgctccgttagccacctctgatctgcccaagcccgtggctcagaatggtctcaaa
actacaccacctttgaagaaaaaactggaaactttagaacttctgaaggaagaaatgcgc
aagaagcaggagatgcttgagcaaaagcgtaatgagttccgacgcaagttggataaactt
gagaagcaagctgtgggtgtgaaagatgaagcagcgccagatcaggctatgaacaaacca
aagggaggaggaacagtttccaactccggtaaagtggaaaattcaagccccgtagaacct
agtaacactgtgttatcaccaccatctgaagcaacaccagatagtagcagatctacagag
aatgccgaacccaattgttcaaaatcatcttcgactgttgcaacgcagggcgcacctttt
atcttaaatagatacaaactagataaccggcccaccgcattcaagatccttccgcctcta
ccaagtgctctggcaaacgttgacgtcctgaaggagcacttttctacttttggtgatcct
ccttctgttgagctggaagatttggaacctcaagattgtaataatggctcagaggtgcaa
aatacatctgctaagatatctttccgatcacgttgttctgctgaaagagcatttctgaat
ggtaaatcctggcaaggccaaattctgcagcttatgtgggtgcaatccagtaatcctgca
aaggatgttggtgttggagataacgtcactccagcttcaaagcagccttcagatgctaat
gggcaatccaatgcaaaaattggtgtggctgatctaccggaaggaagtgtggcagggaac
catgaacctaacaatcaaggaagaagagaagatgaataa
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